RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 ABHD16BQ9H3Z7 469 aa20.68■□□□□ 0.9
COL9A1-203ENST00000360859 ERC2O15083 957 aa20.67■□□□□ 0.9
COL9A1-203ENST00000360859 C6orf222P0C671 652 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-203ENST00000360859 TFAP4Q01664 338 aa20.67■□□□□ 0.9
COL9A1-203ENST00000360859 CCDC144BQ3MJ40 725 aa20.67■□□□□ 0.9
COL9A1-203ENST00000360859 ARMCX2Q7L311 632 aa20.67■□□□□ 0.9
COL9A1-203ENST00000360859 OTUD7AQ8TE49 926 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-203ENST00000360859 COL25A1Q9BXS0 654 aaPredicted RBP20.67■□□□□ 0.9
COL9A1-203ENST00000360859 NAPBQ9H115 298 aa20.67■□□□□ 0.9
COL9A1-203ENST00000360859 HOMER2Q9NSB8 354 aa20.67■□□□□ 0.9
COL9A1-203ENST00000360859 CUL9Q8IWT3 2517 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 TMEM232C9JQI7 657 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
COL9A1-203ENST00000360859 FDX1P10109 184 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 PPARAQ07869 468 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 ZMYM1Q5SVZ6 1142 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 CCDC144CPQ8IYA2 1237 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 PCSK9Q8NBP7 692 aaKnown RBP20.66■□□□□ 0.9
COL9A1-203ENST00000360859 MYLIPQ8WY64 445 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 GLT1D1Q96MS3 346 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 FSD1Q9BTV5 496 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 UPF3AQ9H1J1 476 aaKnown RBP20.66■□□□□ 0.9
COL9A1-203ENST00000360859 TBX21Q9UL17 535 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 ISY1Q9ULR0 285 aaKnown RBP20.66■□□□□ 0.9
COL9A1-203ENST00000360859 PCDHB15Q9Y5E8 787 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 ELP1O95163 1332 aa20.66■□□□□ 0.9
COL9A1-203ENST00000360859 TIMP1P01033 207 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 ASGR1P07306 291 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 CDK7P50613 346 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 STAT2P52630 851 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 GJA9P57773 515 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 CNTN2Q02246 1040 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 MAFAQ8NHW3 353 aaPredicted RBP20.65■□□□□ 0.9
COL9A1-203ENST00000360859 GMCL1Q96IK5 515 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 KATNBL1Q9H079 304 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
COL9A1-203ENST00000360859 ZNF536O15090 1300 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 MROH7Q68CQ1 1323 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 GNASQ5JWF2 1037 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 FAM160B2Q86V87 743 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 FAM133AQ8N9E0 248 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 STAG1Q8WVM7 1258 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 VTI1AQ96AJ9 217 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 CHMP4CQ96CF2 233 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 AGBL1Q96MI9 1066 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 ACAD9Q9H845 621 aa20.64■□□□□ 0.89
COL9A1-203ENST00000360859 MCM3APO60318 1980 aa20.63■□□□□ 0.89
COL9A1-203ENST00000360859 TMEM265A0A087WTH1 108 aa20.63■□□□□ 0.89
COL9A1-203ENST00000360859 MCCP23508 829 aa20.63■□□□□ 0.89
COL9A1-203ENST00000360859 SLC1A4P43007 532 aa20.63■□□□□ 0.89
COL9A1-203ENST00000360859 IKQ13123 557 aaPredicted RBP20.63■□□□□ 0.89
COL9A1-203ENST00000360859 A1CFQ9NQ94 594 aaKnown RBP20.63■□□□□ 0.89
COL9A1-203ENST00000360859 RNF146Q9NTX7 359 aa20.63■□□□□ 0.89
COL9A1-203ENST00000360859 EYSQ5T1H1 3165 aa20.63■□□□□ 0.89
COL9A1-203ENST00000360859 CTAGE5O15320 804 aa20.62■□□□□ 0.89
COL9A1-203ENST00000360859 FOXP2O15409 715 aa20.62■□□□□ 0.89
COL9A1-203ENST00000360859 NKX3-2P78367 333 aa20.62■□□□□ 0.89
COL9A1-203ENST00000360859 MFSD5Q6N075 450 aa20.62■□□□□ 0.89
COL9A1-203ENST00000360859 INCENPQ9NQS7 918 aa20.62■□□□□ 0.89
COL9A1-203ENST00000360859 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.62■□□□□ 0.89
COL9A1-203ENST00000360859 A0A0U1RQG5 324 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-203ENST00000360859 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-203ENST00000360859 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.61■□□□□ 0.89
COL9A1-203ENST00000360859 SOWAHBA6NEL2 793 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 ARVCFO00192 962 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 PLA2G6O60733 806 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 FOSL2P15408 326 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 MX1P20591 662 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 TKFCQ3LXA3 575 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 PPP4R3BQ5MIZ7 849 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 CCDC129Q6ZRS4 1044 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 TRERF1Q96PN7 1200 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.61■□□□□ 0.89
COL9A1-203ENST00000360859 IL17RBQ9NRM6 502 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 STX8Q9UNK0 236 aa20.61■□□□□ 0.89
COL9A1-203ENST00000360859 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.6■□□□□ 0.89
COL9A1-203ENST00000360859 TSPY2A6NKD2 308 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 NMT2O60551 498 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 ALAS1P13196 640 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 DNAJB2P25686 324 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 SNAP25P60880 206 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 BEX3Q00994 111 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 TNFAIP2Q03169 654 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 CTDSPL2Q05D32 466 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 RCSD1Q6JBY9 416 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 KCTD1Q719H9 257 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 FAM126BQ8IXS8 530 aa20.6■□□□□ 0.89
COL9A1-203ENST00000360859 ASTN1O14525 1302 aa20.59■□□□□ 0.89
COL9A1-203ENST00000360859 ASB14A6NK59 587 aa20.59■□□□□ 0.89
COL9A1-203ENST00000360859 PPIGQ13427 754 aaKnown RBP eCLIP20.59■□□□□ 0.89
COL9A1-203ENST00000360859 CCDC174Q6PII3 467 aa20.59■□□□□ 0.89
COL9A1-203ENST00000360859 NOL8Q76FK4 1167 aaKnown RBP20.59■□□□□ 0.89
COL9A1-203ENST00000360859 C16orf59Q7L2K0 433 aa20.59■□□□□ 0.89
COL9A1-203ENST00000360859 PRR12Q9ULL5 1215 aa20.59■□□□□ 0.89
COL9A1-203ENST00000360859 SALL3Q9BXA9 1300 aa20.58■□□□□ 0.89
COL9A1-203ENST00000360859 CSF2RAP15509 400 aa20.58■□□□□ 0.89
COL9A1-203ENST00000360859 GRIN2CQ14957 1233 aa20.58■□□□□ 0.89
COL9A1-203ENST00000360859 TMEM240Q5SV17 173 aa20.58■□□□□ 0.89
COL9A1-203ENST00000360859 RASGRP2Q7LDG7 609 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms