RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 SLFN13Q68D06 897 aa17.92■□□□□ 0.46
GDPD3-201ENST00000360688 TSPY3P0CV98 308 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 TSPY8P0CW00 308 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 LRRFIP1Q32MZ4 808 aaKnown RBP17.91■□□□□ 0.46
GDPD3-201ENST00000360688 CCDC144BQ3MJ40 725 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 ARMCX2Q7L311 632 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 MAFAQ8NHW3 353 aaPredicted RBP17.91■□□□□ 0.46
GDPD3-201ENST00000360688 MYLIPQ8WY64 445 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 GLT1D1Q96MS3 346 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 NACAP1Q9BZK3 213 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 TBX21Q9UL17 535 aa17.91■□□□□ 0.46
GDPD3-201ENST00000360688 ELP1O95163 1332 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 TTC41PQ6P2S7 1318 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 TIMP1P01033 207 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 ASGR1P07306 291 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 C6orf222P0C671 652 aaPredicted RBP17.9■□□□□ 0.46
GDPD3-201ENST00000360688 TFAP4Q01664 338 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 PDE4BQ07343 736 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 PCSK9Q8NBP7 692 aaKnown RBP17.9■□□□□ 0.46
GDPD3-201ENST00000360688 PI4K2BQ8TCG2 481 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 UPF3AQ9H1J1 476 aaKnown RBP17.9■□□□□ 0.46
GDPD3-201ENST00000360688 HOMER2Q9NSB8 354 aa17.9■□□□□ 0.46
GDPD3-201ENST00000360688 TMEM265A0A087WTH1 108 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 TMEM232C9JQI7 657 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 FDX1P10109 184 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 CDK7P50613 346 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 GJA9P57773 515 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 CNTN2Q02246 1040 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 KATNBL1Q9H079 304 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 NAPBQ9H115 298 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 SPC25Q9HBM1 224 aa17.89■□□□□ 0.45
GDPD3-201ENST00000360688 ZNF536O15090 1300 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 MROH7Q68CQ1 1323 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 ERC2O15083 957 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 SLC3A2P08195 630 aaKnown RBP17.88■□□□□ 0.45
GDPD3-201ENST00000360688 STAT2P52630 851 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 PPARAQ07869 468 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 GNASQ5JWF2 1037 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 ZMYM1Q5SVZ6 1142 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 FAM133AQ8N9E0 248 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 OTUD7AQ8TE49 926 aaPredicted RBP17.88■□□□□ 0.45
GDPD3-201ENST00000360688 CHURC1Q8WUH1 139 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 GMCL1Q96IK5 515 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 FSD1Q9BTV5 496 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 ACAD9Q9H845 621 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 ISY1Q9ULR0 285 aaKnown RBP17.88■□□□□ 0.45
GDPD3-201ENST00000360688 MYO9BQ13459 2157 aa17.88■□□□□ 0.45
GDPD3-201ENST00000360688 CHD9Q3L8U1 2897 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 CTAGE5O15320 804 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 FOSL2P15408 326 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 MFSD5Q6N075 450 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 FAM160B2Q86V87 743 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 STAG1Q8WVM7 1258 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 VTI1AQ96AJ9 217 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 CHMP4CQ96CF2 233 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 AGBL1Q96MI9 1066 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.45
GDPD3-201ENST00000360688 A1CFQ9NQ94 594 aaKnown RBP17.87■□□□□ 0.45
GDPD3-201ENST00000360688 RNF146Q9NTX7 359 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 SPTBN5Q9NRC6 3674 aaKnown RBP17.87■□□□□ 0.45
GDPD3-201ENST00000360688 LRRC37A2A6NM11 1700 aa17.87■□□□□ 0.45
GDPD3-201ENST00000360688 A0A0U1RQG5 324 aaPredicted RBP17.86■□□□□ 0.45
GDPD3-201ENST00000360688 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.86■□□□□ 0.45
GDPD3-201ENST00000360688 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.86■□□□□ 0.45
GDPD3-201ENST00000360688 ARVCFO00192 962 aa17.86■□□□□ 0.45
GDPD3-201ENST00000360688 FOXP2O15409 715 aa17.86■□□□□ 0.45
GDPD3-201ENST00000360688 MCCP23508 829 aa17.86■□□□□ 0.45
GDPD3-201ENST00000360688 SLC1A4P43007 532 aa17.86■□□□□ 0.45
GDPD3-201ENST00000360688 NKX3-2P78367 333 aa17.86■□□□□ 0.45
GDPD3-201ENST00000360688 IKQ13123 557 aaPredicted RBP17.86■□□□□ 0.45
GDPD3-201ENST00000360688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.86■□□□□ 0.45
GDPD3-201ENST00000360688 LCTP09848 1927 aa17.86■□□□□ 0.45
GDPD3-201ENST00000360688 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.85■□□□□ 0.45
GDPD3-201ENST00000360688 SOWAHBA6NEL2 793 aa17.85■□□□□ 0.45
GDPD3-201ENST00000360688 DNAJB2P25686 324 aa17.85■□□□□ 0.45
GDPD3-201ENST00000360688 CTDSPL2Q05D32 466 aa17.85■□□□□ 0.45
GDPD3-201ENST00000360688 C16orf59Q7L2K0 433 aa17.85■□□□□ 0.45
GDPD3-201ENST00000360688 FAM126BQ8IXS8 530 aa17.85■□□□□ 0.45
GDPD3-201ENST00000360688 TRERF1Q96PN7 1200 aa17.85■□□□□ 0.45
GDPD3-201ENST00000360688 ASTN1O14525 1302 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 ASB14A6NK59 587 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 PLA2G6O60733 806 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 ALAS1P13196 640 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 MX1P20591 662 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 BEX3Q00994 111 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 TNFAIP2Q03169 654 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 PPIGQ13427 754 aaKnown RBP eCLIP17.84■□□□□ 0.45
GDPD3-201ENST00000360688 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 PPP4R3BQ5MIZ7 849 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 RCSD1Q6JBY9 416 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 KCTD1Q719H9 257 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 INCENPQ9NQS7 918 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 IL17RBQ9NRM6 502 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 STX8Q9UNK0 236 aa17.84■□□□□ 0.45
GDPD3-201ENST00000360688 GNEQ9Y223 722 aaKnown RBP17.84■□□□□ 0.45
GDPD3-201ENST00000360688 TSPY2A6NKD2 308 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms