RNA–Protein interactions for RNA: ENST00000360212.6

CD46-206, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-206ENST00000360212 SSRP1Q08945 709 aaKnown RBP9.58□□□□□ -0.88
CD46-206ENST00000360212 GNPTABQ3T906 1256 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 ANKRD20A8PQ5CZ79 823 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 TMEM67Q5HYA8 995 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 DDX42Q86XP3 938 aaKnown RBP eCLIP9.58□□□□□ -0.881e-9■■■□□ 17.6
CD46-206ENST00000360212 KCNV2Q8TDN2 545 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 CCDC51Q96ER9 411 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 ESF1Q9H501 851 aaKnown RBP9.58□□□□□ -0.88
CD46-206ENST00000360212 PICK1Q9NRD5 415 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 PLAAQ9Y263 795 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 CRYBG1Q9Y4K1 1723 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 DLC1Q96QB1 1528 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 SMIM23A6NLE4 172 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 PECAM1P16284 738 aaPredicted RBP9.58□□□□□ -0.88
CD46-206ENST00000360212 EARS2Q5JPH6 523 aaKnown RBP9.58□□□□□ -0.88
CD46-206ENST00000360212 TRIM68Q6AZZ1 485 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 PRCCQ92733 491 aaPredicted RBP9.58□□□□□ -0.88
CD46-206ENST00000360212 HVCN1Q96D96 273 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 SAAL1Q96ER3 474 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 KRT12Q99456 494 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 SNX12Q9UMY4 172 aa9.58□□□□□ -0.88
CD46-206ENST00000360212 GPAA1O43292 621 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 DIAPH2O60879 1101 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 ANP32DO95626 131 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 PMS1P54277 932 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 IQCEQ6IPM2 695 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 DNAJC14Q6Y2X3 702 aaPredicted RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 ARMCX6Q7L4S7 300 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 C3orf20Q8ND61 904 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 SEC16BQ96JE7 1060 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 OSBPL9Q96SU4 736 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 NCAPD2Q15021 1401 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 PARP1P09874 1014 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 RFX5P48382 616 aaPredicted RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 ICA1Q05084 483 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 CTDSPL2Q05D32 466 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 NT5DC1Q5TFE4 455 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 CAPRIN2Q6IMN6 1127 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 TLDC1Q6P9B6 456 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 KDM7AQ6ZMT4 941 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 ANKRD23Q86SG2 305 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 EHBP1Q8NDI1 1231 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 NUP58Q9BVL2 599 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 COPRSQ9NQ92 184 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 ZNHIT6Q9NWK9 470 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 ZNF330Q9Y3S2 320 aaPredicted RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 SLC12A7Q9Y666 1083 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 GMNCA6NCL1 334 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 GOLGA6L10A6NI86 522 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 IFIT3O14879 490 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 ZNF263O14978 683 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 CDKL5O76039 1030 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 ATP6V1G2O95670 118 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 PAFAH1B1P43034 410 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 ZAP70P43403 619 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 KRT83P78385 493 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 PAK1Q13153 545 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 ALS2CLQ60I27 953 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 RBM33Q96EV2 1170 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 SLC39A2Q9NP94 309 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 STK38LQ9Y2H1 464 aa9.57□□□□□ -0.88
CD46-206ENST00000360212 THRAP3Q9Y2W1 955 aaKnown RBP9.57□□□□□ -0.88
CD46-206ENST00000360212 MYH15Q9Y2K3 1946 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 SRCAPQ6ZRS2 3230 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 IDH1O75874 414 aaKnown RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 FTCDO95954 541 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 SPA17Q15506 151 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 LMOD2Q6P5Q4 547 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 BZW1Q7L1Q6 419 aaKnown RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 C2CD5Q86YS7 1000 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 CACNA2D3Q8IZS8 1091 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 ATP6V1G3Q96LB4 118 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 IFIH1Q9BYX4 1025 aaKnown RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 ATP6V0A4Q9HBG4 840 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 LRRC4CQ9HCJ2 640 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 FAM207AQ9NSI2 230 aaPredicted RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 FAM237AA0A1B0GTK4 181 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 CYLC1P35663 651 aaPredicted RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 PRCPP42785 496 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 C1orf141Q5JVX7 400 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 EMBQ6PCB8 327 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 CADPS2Q86UW7 1296 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 KIF2BQ8N4N8 673 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 TRIML1Q8N9V2 468 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 RPGRIP1Q96KN7 1286 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 TRIM47Q96LD4 638 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 SUDS3Q9H7L9 328 aaPredicted RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 FAM217BQ9NTX9 383 aaPredicted RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 SALL4Q9UJQ4 1053 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 NOVA2Q9UNW9 492 aaKnown RBP9.56□□□□□ -0.88
CD46-206ENST00000360212 OVOS2A0A0J9YW53 1432 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 OVOS2Q6IE36 1432 aa9.56□□□□□ -0.88
CD46-206ENST00000360212 A8MUI8 341 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 ELF3P78545 371 aaPredicted RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 USP4Q13107 963 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 PDCD2Q16342 344 aaPredicted RBP9.55□□□□□ -0.88
CD46-206ENST00000360212 DNAAF5Q86Y56 855 aa9.55□□□□□ -0.88
CD46-206ENST00000360212 KSR1Q8IVT5 923 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms