RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 EFCC1Q9HA90 598 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 VPS54Q9P1Q0 977 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 AMFRQ9UKV5 643 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 ZBTB21Q9ULJ3 1066 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 MRPL11Q9Y3B7 192 aaKnown RBP13.47□□□□□ -0.25
DNMT1-202ENST00000359526 TRIM37O94972 964 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 STRN3Q13033 797 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 CEP85LQ5SZL2 805 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 DENND2CQ68D51 928 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
DNMT1-202ENST00000359526 PRDM1O75626 825 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 GRAPQ13588 217 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 GNPTABQ3T906 1256 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 TYW1BQ6NUM6 668 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 GABPB2Q8TAK5 448 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-202ENST00000359526 GRAPLQ8TC17 118 aaPredicted RBP13.46□□□□□ -0.25
DNMT1-202ENST00000359526 MIPOL1Q8TD10 442 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 GPR162Q16538 588 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 HHATQ5VTY9 493 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.25
DNMT1-202ENST00000359526 BLZF1Q9H2G9 400 aa13.46□□□□□ -0.25
DNMT1-202ENST00000359526 RASSF2P50749 326 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 KRT26Q7Z3Y9 468 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 BLIDQ8IZY5 108 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 ZSCAN10Q96SZ4 725 aaPredicted RBP13.46□□□□□ -0.26
DNMT1-202ENST00000359526 AATFQ9NY61 560 aaKnown RBP eCLIP13.46□□□□□ -0.26
DNMT1-202ENST00000359526 NARFQ9UHQ1 456 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 RNASE9P60153 205 aaKnown RBP13.46□□□□□ -0.26
DNMT1-202ENST00000359526 DALRD3Q5D0E6 543 aaKnown RBP13.46□□□□□ -0.26
DNMT1-202ENST00000359526 DYMQ7RTS9 669 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 SULF1Q8IWU6 871 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 FANCBQ8NB91 859 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 BAIAP2L1Q9UHR4 511 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 DDX41Q9UJV9 622 aaKnown RBP13.46□□□□□ -0.26
DNMT1-202ENST00000359526 CAPN7Q9Y6W3 813 aa13.46□□□□□ -0.26
DNMT1-202ENST00000359526 CCDC169A6NNP5 214 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 STK10O94804 968 aaKnown RBP13.45□□□□□ -0.26
DNMT1-202ENST00000359526 FOSP01100 380 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-202ENST00000359526 LRMPQ12912 555 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 USPL1Q5W0Q7 1092 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 ZNF354CQ86Y25 554 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 P3H4Q92791 437 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 EXOC3O60645 756 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 OSBPP22059 807 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 LONP1P36776 959 aaKnown RBP13.45□□□□□ -0.26
DNMT1-202ENST00000359526 ARMC9Q7Z3E5 817 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 IFNL3Q8IZI9 196 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 MYOCDQ8IZQ8 938 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 SUGT1Q9Y2Z0 365 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 E7EVH7 732 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
DNMT1-202ENST00000359526 PSMC4P43686 418 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 LONRF3Q496Y0 759 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 CCDC105Q8IYK2 499 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 GPHNQ9NQX3 736 aaPredicted RBP13.45□□□□□ -0.26
DNMT1-202ENST00000359526 RNF40O75150 1001 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 SLC8A3P57103 927 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 PKP1Q13835 747 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 MYCT1Q8N699 235 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 FBXO18Q8NFZ0 1043 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 MICAL1Q8TDZ2 1067 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 VCX3BQ9H321 246 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.45□□□□□ -0.26
DNMT1-202ENST00000359526 USP40Q9NVE5 1235 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 POLR3EQ9NVU0 708 aa13.45□□□□□ -0.26
DNMT1-202ENST00000359526 PDE8BO95263 885 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 TFAP4Q01664 338 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 TRPC3Q13507 836 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 GJD4Q96KN9 370 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 DDX23Q9BUQ8 820 aaKnown RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 CUEDC2Q9H467 287 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 ANTXR1Q9H6X2 564 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 FAM207AQ9NSI2 230 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 ITSN1Q15811 1721 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 UAP1Q16222 522 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 PHLPP2Q6ZVD8 1323 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 DPH6Q7L8W6 267 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 MCUR1Q96AQ8 359 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 GSDMAQ96QA5 445 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 MRPL44Q9H9J2 332 aaKnown RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 FANCLQ9NW38 375 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 VWDEQ8N2E2 1590 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 COPB2P35606 906 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 STAT1P42224 750 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 SLC1A4P43007 532 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 ITIH3Q06033 890 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 SLC39A14Q15043 492 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 TRIM31Q9BZY9 425 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 RRP15Q9Y3B9 282 aaKnown RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 TAF5LO75529 589 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 ARL1P40616 181 aaPredicted RBP13.44□□□□□ -0.26
DNMT1-202ENST00000359526 NDUFA8P51970 172 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 CCDC38Q502W7 563 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 AFAP1L2Q8N4X5 818 aa13.44□□□□□ -0.26
DNMT1-202ENST00000359526 LSM14BQ9BX40 385 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms