RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 ZBTB5O15062 677 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 CTNND1O60716 968 aaKnown RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 KINO60870 393 aaKnown RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 BMP3P12645 472 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 LIG1P18858 919 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 AXDND1Q5T1B0 1012 aaPredicted RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 NBPF12Q5TAG4 269 aaPredicted RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 PRAMEF18Q5VWM3 479 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 DLK2Q6UY11 383 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 RBM43Q6ZSC3 357 aaKnown RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 FSIP1Q8NA03 581 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 CCDC102AQ96A19 550 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 TIGD1Q96MW7 591 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 FTOQ9C0B1 505 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 UBA5Q9GZZ9 404 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 TNMDQ9H2S6 317 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 JMJD4Q9H9V9 463 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 GPCPD1Q9NPB8 672 aa15.43■□□□□ 0.06
CCDC197-201ENST00000359253 SRPRBQ9Y5M8 271 aaKnown RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 FRMPD2Q68DX3 1309 aaPredicted RBP15.43■□□□□ 0.06
CCDC197-201ENST00000359253 TRPM7Q96QT4 1865 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 SMCO2A6NFE2 343 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 LAD1O00515 517 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 PTPREP23469 700 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 ECE1P42892 770 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 TTC38Q5R3I4 469 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 LDLRAD1Q5T700 205 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 ELOA2Q8IYF1 753 aaPredicted RBP15.42■□□□□ 0.06
CCDC197-201ENST00000359253 ENGASEQ8NFI3 743 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 TSPY26PQ9H489 355 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 VAT1LQ9HCJ6 419 aa15.42■□□□□ 0.06
CCDC197-201ENST00000359253 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
CCDC197-201ENST00000359253 PHF20L1A8MW92 1017 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 NR1I2O75469 434 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 USP2O75604 605 aaPredicted RBP15.41■□□□□ 0.06
CCDC197-201ENST00000359253 CAVIN2O95810 425 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 NDUFB10O96000 172 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 IREB2P48200 963 aaKnown RBP15.41■□□□□ 0.06
CCDC197-201ENST00000359253 MRPL12P52815 198 aaKnown RBP15.41■□□□□ 0.06
CCDC197-201ENST00000359253 HUNKP57058 714 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 RRP1BQ14684 758 aaKnown RBP15.41■□□□□ 0.06
CCDC197-201ENST00000359253 ARL6IP4Q66PJ3 421 aaKnown RBP15.41■□□□□ 0.06
CCDC197-201ENST00000359253 FAM160B2Q86V87 743 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 HOMER1Q86YM7 354 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 CLEC10AQ8IUN9 316 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 CHURC1Q8WUH1 139 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 PIBF1Q8WXW3 757 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 GPKOWQ92917 476 aaPredicted RBP eCLIP15.41■□□□□ 0.06
CCDC197-201ENST00000359253 ZNF341Q9BYN7 854 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 VCPKMTQ9H867 229 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 GRPEL1Q9HAV7 217 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 FAM13BQ9NYF5 915 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 PCDHA6Q9UN73 950 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 PCDHA8Q9Y5H6 950 aa15.41■□□□□ 0.06
CCDC197-201ENST00000359253 CCDC192P0DO97 292 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 SNW1Q13573 536 aaKnown RBP15.4■□□□□ 0.06
CCDC197-201ENST00000359253 RESP18Q5W5W9 173 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 RGMBQ6NW40 437 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 PIK3AP1Q6ZUJ8 805 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 KCTD1Q719H9 257 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 MIGA2Q7L4E1 593 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 FMR1NBQ8N0W7 255 aaPredicted RBP15.4■□□□□ 0.06
CCDC197-201ENST00000359253 KLRG1Q96E93 195 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 CCDC34Q96HJ3 373 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 NAP1L4Q99733 375 aaKnown RBP15.4■□□□□ 0.06
CCDC197-201ENST00000359253 PYM1Q9BRP8 204 aaKnown RBP15.4■□□□□ 0.06
CCDC197-201ENST00000359253 RIC8AQ9NPQ8 531 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 ZNF112Q9UJU3 913 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 PCDHB6Q9Y5E3 794 aa15.4■□□□□ 0.06
CCDC197-201ENST00000359253 SLURP2P0DP57 97 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 MARCKSP29966 332 aaPredicted RBP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 MAP2K2P36507 400 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 ADCY7P51828 1080 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 JAG1P78504 1218 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 MAP3K9P80192 1104 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 ATP2C1P98194 919 aaPredicted RBP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 TTLL12Q14166 644 aaPredicted RBP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 NONOQ15233 471 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 SYDE2Q5VT97 1194 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 TTBK2Q6IQ55 1244 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 TYW1BQ6NUM6 668 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 GAS2L3Q86XJ1 694 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 REM2Q8IYK8 340 aaPredicted RBP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 ANKRD13AQ8IZ07 590 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 REXO1Q8N1G1 1221 aaKnown RBP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 LPAR1Q92633 364 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 AMNQ9BXJ7 453 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 FBXO2Q9UK22 296 aaPredicted RBP15.39■□□□□ 0.05
CCDC197-201ENST00000359253 HPSEQ9Y251 543 aa15.39■□□□□ 0.05
CCDC197-201ENST00000359253 A0A1W2PRG0 241 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 USP17L10C9JJH3 530 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 STAT2P52630 851 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 UVSSAQ2YD98 709 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 CUL5Q93034 780 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 SLC10A4Q96EP9 437 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 CPVLQ9H3G5 476 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 AS3MTQ9HBK9 375 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 HOOK1Q9UJC3 728 aaKnown RBP15.38■□□□□ 0.05
CCDC197-201ENST00000359253 FEM1BQ9UK73 627 aa15.38■□□□□ 0.05
CCDC197-201ENST00000359253 PNMA2Q9UL42 364 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms