RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 IL17RBQ9NRM6 502 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
NIPAL3-203ENST00000358028 NLRP5P59047 1200 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 KRT26Q7Z3Y9 468 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 PDCL2Q8N4E4 241 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 TGFBRAP1Q8WUH2 860 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 SMARCE1Q969G3 411 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 FERMT2Q96AC1 680 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 DCPSQ96C86 337 aaKnown RBP16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 MKNK2Q9HBH9 465 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 TCP11L1Q9NUJ3 509 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 CNTNAP1P78357 1384 aa16.24■□□□□ 0.19
NIPAL3-203ENST00000358028 TMEM88BA6NKF7 163 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 WNT7AO00755 349 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 BMP6P22004 513 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 SARSP49591 514 aaKnown RBP16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 GRM4Q14833 912 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 NOM1Q5C9Z4 860 aaKnown RBP16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 CT47A1Q5JQC4 288 aaPredicted RBP16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 ARMCX5Q6P1M9 558 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 USP49Q70CQ1 688 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 PNMA1Q8ND90 353 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 KIF18AQ8NI77 898 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 TEKT1Q969V4 418 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 CCDC34Q96HJ3 373 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 PITPNM2Q9BZ72 1349 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 CLRN2A0PK11 232 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 USP27XA6NNY8 438 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 ATP1A3P13637 1013 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 PRKCSHP14314 528 aaPredicted RBP16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 BTDP43251 543 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 HDLBPQ00341 1268 aaKnown RBP16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 MORC3Q14149 939 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 ZNF174Q15697 407 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 MAPKAPK5Q8IW41 473 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 PDILTQ8N807 584 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 MLKLQ8NB16 471 aa16.23■□□□□ 0.19
NIPAL3-203ENST00000358028 TSPY3P0CV98 308 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 TSPY8P0CW00 308 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 TRAPPC10P48553 1259 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 GNAQP50148 359 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 UBASH3AP57075 661 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 ATP2C1P98194 919 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 NCBP1Q09161 790 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 SULF1Q8IWU6 871 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 GRAMD1CQ8IYS0 662 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 ZNF444Q8N0Y2 327 aaPredicted RBP16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 ZDHHC15Q96MV8 337 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 TDRD3Q9H7E2 651 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 SH3GLB2Q9NR46 395 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 SAP30BPQ9UHR5 308 aaKnown RBP16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 DAGLAQ9Y4D2 1042 aa16.22■□□□□ 0.19
NIPAL3-203ENST00000358028 GPR75-ASB3A0A0A6YYF3 556 aa16.21■□□□□ 0.19
NIPAL3-203ENST00000358028 SERPINC1P01008 464 aa16.21■□□□□ 0.19
NIPAL3-203ENST00000358028 CALML3P27482 149 aa16.21■□□□□ 0.19
NIPAL3-203ENST00000358028 PIK3AP1Q6ZUJ8 805 aa16.21■□□□□ 0.19
NIPAL3-203ENST00000358028 DHX58Q96C10 678 aa16.21■□□□□ 0.19
NIPAL3-203ENST00000358028 EPSTI1Q96J88 318 aa16.21■□□□□ 0.19
NIPAL3-203ENST00000358028 A0A087X0B3 334 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 RASA1P20936 1047 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 PLCD1P51178 756 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 E4F1Q66K89 784 aaPredicted RBP16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 APOBEC3HQ6NTF7 200 aaKnown RBP16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 HHIPL2Q6UWX4 724 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 FCHSD1Q86WN1 690 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 VSTM4Q8IW00 320 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 TEX11Q8IYF3 940 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 SLC44A5Q8NCS7 719 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 SPATA20Q8TB22 786 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 SYMPKQ92797 1274 aaKnown RBP16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 MRIQ9BWK5 157 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 VEZTQ9HBM0 779 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 FANCLQ9NW38 375 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 CGNQ9P2M7 1197 aaKnown RBP16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 MAD2L2Q9UI95 211 aa16.21■□□□□ 0.18
NIPAL3-203ENST00000358028 FOCADQ5VW36 1801 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 SLFN14P0C7P3 912 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 PLCG2P16885 1265 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 PTGDRQ13258 359 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 SPDYE2Q495Y8 402 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 SH3RF1Q7Z6J0 888 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 BLIDQ8IZY5 108 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 STAG2Q8N3U4 1231 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 ZNF287Q9HBT7 754 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 ZNF70Q9UC06 446 aaPredicted RBP16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 MYH1P12882 1939 aa16.2■□□□□ 0.18
NIPAL3-203ENST00000358028 GAKO14976 1311 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 ADAMTS3O15072 1205 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 CACNB3P54284 484 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 PRAMEF18Q5VWM3 479 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 C16orf86Q6ZW13 317 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 APOBEC3FQ8IUX4 373 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 SLF2Q8IX21 1173 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 SMAP1Q8IYB5 467 aaPredicted RBP16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 ENOX1Q8TC92 643 aaKnown RBP16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 ZNF592Q92610 1267 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 PPP1R13BQ96KQ4 1090 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 FEZ1Q99689 392 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 ZNF408Q9H9D4 720 aa16.19■□□□□ 0.18
NIPAL3-203ENST00000358028 PCDHA4Q9UN74 947 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms