RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.54■□□□□ 0.72
TPM1-205ENST00000357980 ZNF280CQ8ND82 737 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 CHURC1Q8WUH1 139 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 CDCA5Q96FF9 252 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 AS3MTQ9HBK9 375 aa19.54■□□□□ 0.72
TPM1-205ENST00000357980 PPP6R2O75170 966 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 SPP2Q13103 211 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 PRKG1Q13976 671 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 FAM160B2Q86V87 743 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 EMILIN3Q9NT22 766 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 FEM1BQ9UK73 627 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 NOL7Q9UMY1 257 aaKnown RBP19.53■□□□□ 0.72
TPM1-205ENST00000357980 MORC2Q9Y6X9 1032 aaPredicted RBP19.53■□□□□ 0.72
TPM1-205ENST00000357980 SMCHD1A6NHR9 2005 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 TRIM75PA6NK02 468 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 PPP1R12BO60237 982 aaPredicted RBP19.53■□□□□ 0.72
TPM1-205ENST00000357980 LIG1P18858 919 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 ADCY7P51828 1080 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 BACE1P56817 501 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 SNAP25P60880 206 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 VGLL4Q14135 290 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 AXDND1Q5T1B0 1012 aaPredicted RBP19.53■□□□□ 0.72
TPM1-205ENST00000357980 ADALQ6DHV7 355 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 RIC8AQ9NPQ8 531 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 SNCAIPQ9Y6H5 919 aa19.53■□□□□ 0.72
TPM1-205ENST00000357980 CCDC194A0A1B0GVG4 234 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 USP14P54578 494 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 DGKZQ13574 1117 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 REXO1Q8N1G1 1221 aaKnown RBP19.52■□□□□ 0.72
TPM1-205ENST00000357980 AMNQ9BXJ7 453 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 RANBP17Q9H2T7 1088 aaKnown RBP19.52■□□□□ 0.72
TPM1-205ENST00000357980 FBXO28Q9NVF7 368 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 PCDHA1Q9Y5I3 950 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 ZHX2Q9Y6X8 837 aa19.52■□□□□ 0.72
TPM1-205ENST00000357980 RLFQ13129 1914 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 A0A1W2PQ27 194 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 A0A1W2PQ64 194 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 A0A1W2PQD8 194 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 VCAM1P19320 739 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 MARCKSP29966 332 aaPredicted RBP19.51■□□□□ 0.71
TPM1-205ENST00000357980 MAP3K9P80192 1104 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 ZSCAN23Q3MJ62 389 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 TTC38Q5R3I4 469 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 KRT25Q7Z3Z0 450 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 FBXO11Q86XK2 927 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 JMYQ8N9B5 988 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 ATP2B1P20020 1258 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 CLK2P49760 499 aaKnown RBP19.51■□□□□ 0.71
TPM1-205ENST00000357980 CUL5Q93034 780 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 C12orf42Q96LP6 360 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 CEP131Q9UPN4 1083 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 AFG3L2Q9Y4W6 797 aa19.51■□□□□ 0.71
TPM1-205ENST00000357980 POTEIP0CG38 1075 aa19.5■□□□□ 0.71
TPM1-205ENST00000357980 POTEJP0CG39 1038 aa19.5■□□□□ 0.71
TPM1-205ENST00000357980 SYAP1Q96A49 352 aaPredicted RBP19.5■□□□□ 0.71
TPM1-205ENST00000357980 KIFC2Q96AC6 838 aa19.5■□□□□ 0.71
TPM1-205ENST00000357980 GOLPH3LQ9H4A5 285 aa19.5■□□□□ 0.71
TPM1-205ENST00000357980 BMP15O95972 392 aa19.49■□□□□ 0.71
TPM1-205ENST00000357980 NF2P35240 595 aa19.49■□□□□ 0.71
TPM1-205ENST00000357980 IREB2P48200 963 aaKnown RBP19.49■□□□□ 0.71
TPM1-205ENST00000357980 GSE1Q14687 1217 aa19.49■□□□□ 0.71
TPM1-205ENST00000357980 MAP3K11Q16584 847 aa19.49■□□□□ 0.71
TPM1-205ENST00000357980 CCAR1Q8IX12 1150 aaKnown RBP19.49■□□□□ 0.71
TPM1-205ENST00000357980 PSTPIP2Q9H939 334 aa19.49■□□□□ 0.71
TPM1-205ENST00000357980 BIN2Q9UBW5 565 aaPredicted RBP19.49■□□□□ 0.71
TPM1-205ENST00000357980 C19orf81C9J6K1 198 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 MRPL12P52815 198 aaKnown RBP19.48■□□□□ 0.71
TPM1-205ENST00000357980 NONOQ15233 471 aaKnown RBP eCLIP19.48■□□□□ 0.71
TPM1-205ENST00000357980 INF2Q27J81 1249 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 CCDC183Q5T5S1 534 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 SLF1Q9BQI6 1058 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 GLT8D2Q9H1C3 349 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 TMEM260Q9NX78 707 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 FBXO2Q9UK22 296 aaPredicted RBP19.48■□□□□ 0.71
TPM1-205ENST00000357980 CSADQ9Y600 493 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 MYH7BA7E2Y1 1941 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 NR1I2O75469 434 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 PTPREP23469 700 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 ZNF174Q15697 407 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 JAKMIP3Q5VZ66 844 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 KRI1Q8N9T8 703 aaKnown RBP19.48■□□□□ 0.71
TPM1-205ENST00000357980 PRPF38AQ8NAV1 312 aaKnown RBP19.48■□□□□ 0.71
TPM1-205ENST00000357980 MRPS27Q92552 414 aaKnown RBP19.48■□□□□ 0.71
TPM1-205ENST00000357980 RPAP3Q9H6T3 665 aaPredicted RBP19.48■□□□□ 0.71
TPM1-205ENST00000357980 DACT1Q9NYF0 836 aa19.48■□□□□ 0.71
TPM1-205ENST00000357980 LOC285556D6RIA3 1793 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 OPLAHO14841 1288 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 CUTAO60888 179 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 CMA1P23946 247 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 HMGCS2P54868 508 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 SNW1Q13573 536 aaKnown RBP19.47■□□□□ 0.71
TPM1-205ENST00000357980 UBE2SQ16763 222 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 USH1GQ495M9 461 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 FSIP1Q8NA03 581 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 ENGASEQ8NFI3 743 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 TANGO6Q9C0B7 1094 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 MRVI1Q9Y6F6 885 aa19.47■□□□□ 0.71
TPM1-205ENST00000357980 TAL1P17542 331 aaPredicted RBP19.46■□□□□ 0.71
TPM1-205ENST00000357980 ZNF445P59923 1031 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms