RNA–Protein interactions for RNA: ENST00000357508.5

C1orf228-201, Transcript of Uncharacterized protein C1orf228, humanhuman

TSL 1 (best)

Gene C1orf228, Length 2,113 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf228-201ENST00000357508 SERPINC1P01008 464 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 CACNB3P54284 484 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 MED15Q96RN5 788 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 DNAJC18Q9H819 358 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 SLURP2P0DP57 97 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 ERCC5P28715 1186 aaPredicted RBP29.54■■■□□ 2.32
C1orf228-201ENST00000357508 NONOQ15233 471 aaKnown RBP eCLIP29.54■■■□□ 2.32
C1orf228-201ENST00000357508 DTHD1Q6ZMT9 781 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 IDI2Q9BXS1 227 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 NFE2L3Q9Y4A8 694 aa29.54■■■□□ 2.32
C1orf228-201ENST00000357508 LAD1O00515 517 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 ZNF543Q08ER8 600 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 TRMT44Q8IYL2 757 aaKnown RBP29.53■■■□□ 2.32
C1orf228-201ENST00000357508 FAM198AQ9UFP1 575 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 SKILP12757 684 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 TXLNAP40222 546 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 RBM5P52756 815 aaKnown RBP eCLIP29.53■■■□□ 2.32
C1orf228-201ENST00000357508 CT47A1Q5JQC4 288 aaPredicted RBP29.53■■■□□ 2.32
C1orf228-201ENST00000357508 STAMQ92783 540 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 DHX36Q9H2U1 1008 aaKnown RBP29.53■■■□□ 2.32
C1orf228-201ENST00000357508 GPCPD1Q9NPB8 672 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 BCS1LQ9Y276 419 aa29.53■■■□□ 2.32
C1orf228-201ENST00000357508 MPHOSPH10O00566 681 aaKnown RBP29.52■■■□□ 2.32
C1orf228-201ENST00000357508 ZNF18P17022 549 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 PRPHP41219 470 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 TCP10Q12799 353 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 LARGE2Q8N3Y3 721 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 CCDC17Q96LX7 622 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 MTRQ99707 1265 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 SERPINA10Q9UK55 444 aa29.52■■■□□ 2.32
C1orf228-201ENST00000357508 CDC25AP30304 524 aa29.51■■■□□ 2.32
C1orf228-201ENST00000357508 CCDC150Q8NCX0 1101 aa29.51■■■□□ 2.32
C1orf228-201ENST00000357508 COL4A5P29400 1685 aa29.51■■■□□ 2.31
C1orf228-201ENST00000357508 DDTLA6NHG4 134 aaPredicted RBP29.51■■■□□ 2.31
C1orf228-201ENST00000357508 CFAP100Q494V2 611 aa29.51■■■□□ 2.31
C1orf228-201ENST00000357508 ARMCX5Q6P1M9 558 aa29.5■■■□□ 2.31
C1orf228-201ENST00000357508 REXO1Q8N1G1 1221 aaKnown RBP29.5■■■□□ 2.31
C1orf228-201ENST00000357508 GTPBP6O43824 516 aaPredicted RBP29.5■■■□□ 2.31
C1orf228-201ENST00000357508 NPM3O75607 178 aaKnown RBP29.5■■■□□ 2.31
C1orf228-201ENST00000357508 CD44P16070 742 aaKnown RBP29.5■■■□□ 2.31
C1orf228-201ENST00000357508 NEK8Q86SG6 692 aa29.5■■■□□ 2.31
C1orf228-201ENST00000357508 CUL4BQ13620 913 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 KARSQ15046 597 aaKnown RBP29.49■■■□□ 2.31
C1orf228-201ENST00000357508 SH3BP5LQ7L8J4 393 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 PRIMPOLQ96LW4 560 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 BLZF1Q9H2G9 400 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 JMJD4Q9H9V9 463 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 DISC1Q9NRI5 854 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 ARFGEF1Q9Y6D6 1849 aa29.49■■■□□ 2.31
C1orf228-201ENST00000357508 UQCRHLA0A096LP55 91 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 UQCRHP07919 91 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 DHX8Q14562 1220 aaKnown RBP29.48■■■□□ 2.31
C1orf228-201ENST00000357508 LETM2Q2VYF4 491 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 PPP4R3BQ5MIZ7 849 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 COA7Q96BR5 231 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 VPS33BQ9H267 617 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 PI4KBQ9UBF8 816 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 BIN2Q9UBW5 565 aaPredicted RBP29.48■■■□□ 2.31
C1orf228-201ENST00000357508 FAM196BA6NMK8 535 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 HSP90AA4PQ58FG1 418 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 VSTM4Q8IW00 320 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 INTS13Q9NVM9 706 aa29.48■■■□□ 2.31
C1orf228-201ENST00000357508 PP2D1A8MPX8 630 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 CCNT1O60563 726 aaKnown RBP29.47■■■□□ 2.31
C1orf228-201ENST00000357508 STAT6P42226 847 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 ATP2B2Q01814 1243 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 GPATCH4Q5T3I0 446 aaKnown RBP29.47■■■□□ 2.31
C1orf228-201ENST00000357508 JAKMIP3Q5VZ66 844 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 TTBK2Q6IQ55 1244 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 ADGRF4Q8IZF3 695 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 TBCKQ8TEA7 893 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 CCSER1Q9C0I3 900 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 TAOK3Q9H2K8 898 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 TMEM260Q9NX78 707 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 PPP1R3GB7ZBB8 358 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 TMEM232C9JQI7 657 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 NFKBIEO00221 500 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 OR52Z1P0C646 297 aa29.47■■■□□ 2.31
C1orf228-201ENST00000357508 PNMA6FA0A0J9YX94 578 aa29.46■■■□□ 2.31
C1orf228-201ENST00000357508 SFPQP23246 707 aaKnown RBP eCLIP29.46■■■□□ 2.31
C1orf228-201ENST00000357508 ADCY7P51828 1080 aa29.46■■■□□ 2.31
C1orf228-201ENST00000357508 NAALADL2Q58DX5 795 aa29.46■■■□□ 2.31
C1orf228-201ENST00000357508 SAMSN1Q9NSI8 373 aaKnown RBP29.46■■■□□ 2.31
C1orf228-201ENST00000357508 SYNRGQ9UMZ2 1314 aa29.46■■■□□ 2.31
C1orf228-201ENST00000357508 ORC2Q13416 577 aaPredicted RBP29.45■■■□□ 2.31
C1orf228-201ENST00000357508 CCDC96Q2M329 555 aa29.45■■■□□ 2.31
C1orf228-201ENST00000357508 ZSCAN29Q8IWY8 852 aaPredicted RBP29.45■■■□□ 2.31
C1orf228-201ENST00000357508 SMYD4Q8IYR2 804 aaPredicted RBP29.45■■■□□ 2.31
C1orf228-201ENST00000357508 FER1L6Q2WGJ9 1857 aa29.45■■■□□ 2.3
C1orf228-201ENST00000357508 KLHL10Q6JEL2 608 aa29.45■■■□□ 2.3
C1orf228-201ENST00000357508 PPP1R18Q6NYC8 613 aa29.45■■■□□ 2.3
C1orf228-201ENST00000357508 CDK11BP21127 795 aaKnown RBP29.44■■■□□ 2.3
C1orf228-201ENST00000357508 UBA7P41226 1012 aa29.44■■■□□ 2.3
C1orf228-201ENST00000357508 SHROOM1Q2M3G4 852 aaPredicted RBP29.44■■■□□ 2.3
C1orf228-201ENST00000357508 CERKLQ49MI3 558 aaPredicted RBP29.44■■■□□ 2.3
C1orf228-201ENST00000357508 SPATA1Q5VX52 437 aa29.44■■■□□ 2.3
C1orf228-201ENST00000357508 PPP1R11O60927 126 aaPredicted RBP29.44■■■□□ 2.3
C1orf228-201ENST00000357508 RAD17O75943 681 aa29.44■■■□□ 2.3
C1orf228-201ENST00000357508 RRAGBQ5VZM2 374 aa29.44■■■□□ 2.3
C1orf228-201ENST00000357508 TATDN1Q6P1N9 297 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms