RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 NMT2O60551 498 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 PLA2G6O60733 806 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 DUSP11O75319 330 aaKnown RBP12.13□□□□□ -0.47
LINC01560-201ENST00000357412 FGRP09769 529 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 CST5P28325 142 aaPredicted RBP12.13□□□□□ -0.47
LINC01560-201ENST00000357412 STAT2P52630 851 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 EPHB4P54760 987 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 CTDSPL2Q05D32 466 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 HDAC1Q13547 482 aaPredicted RBP12.13□□□□□ -0.47
LINC01560-201ENST00000357412 KCNA10Q16322 511 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 PPP4R3BQ5MIZ7 849 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 ARMCX2Q7L311 632 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 ANKRD33Q7Z3H0 272 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 FAM160B2Q86V87 743 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 FAM133AQ8N9E0 248 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 CHMP4CQ96CF2 233 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 AGBL1Q96MI9 1066 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 TOX2Q96NM4 488 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 ABHD16BQ9H3Z7 469 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
LINC01560-201ENST00000357412 STARD7Q9NQZ5 370 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 HOMER2Q9NSB8 354 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 ANAPC4Q9UJX5 808 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 A0A0G2JMZ2 1700 aa12.13□□□□□ -0.47
LINC01560-201ENST00000357412 NAV1Q8NEY1 1877 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 ZNF236Q9UL36 1845 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 TSPY2A6NKD2 308 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 PDE1AP54750 535 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 CNTN2Q02246 1040 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 FAAP100Q0VG06 881 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 CCDC144BQ3MJ40 725 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 RCSD1Q6JBY9 416 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 KCTD1Q719H9 257 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 RASGRP2Q7LDG7 609 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 CCDC144CPQ8IYA2 1237 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 CHURC1Q8WUH1 139 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 NUP133Q8WUM0 1156 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 FAM161BQ96MY7 647 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 UPF3AQ9H1J1 476 aaKnown RBP12.12□□□□□ -0.47
LINC01560-201ENST00000357412 ACAD9Q9H845 621 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 HELLSQ9NRZ9 838 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 RNF146Q9NTX7 359 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 TMEM39AQ9NV64 488 aa12.12□□□□□ -0.47
LINC01560-201ENST00000357412 ISY1Q9ULR0 285 aaKnown RBP12.12□□□□□ -0.47
LINC01560-201ENST00000357412 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 DLL1O00548 723 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 CTAGE5O15320 804 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 ORC4O43929 436 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 RAG1P15918 1043 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 CDK7P50613 346 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 GJA9P57773 515 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 SNAP25P60880 206 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 NKX3-2P78367 333 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 IKQ13123 557 aaPredicted RBP12.11□□□□□ -0.47
LINC01560-201ENST00000357412 ALX1Q15699 326 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 TKFCQ3LXA3 575 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 FAM227BQ96M60 508 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 TRERF1Q96PN7 1200 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 PRR12Q9ULL5 1215 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 RLFQ13129 1914 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 ELP1O95163 1332 aa12.11□□□□□ -0.47
LINC01560-201ENST00000357412 A0A0D9SFI3 127 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 FGAP02671 866 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 ASGR1P07306 291 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 C6orf222P0C671 652 aaPredicted RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 SMAD3P84022 425 aaKnown RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 ZNF697Q5TEC3 545 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 CCDC174Q6PII3 467 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 PCSK9Q8NBP7 692 aaKnown RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 GLT1D1Q96MS3 346 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 SEMA6BQ9H3T3 888 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 SPC25Q9HBM1 224 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 ZBTB47Q9UFB7 747 aaPredicted RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 TBX21Q9UL17 535 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 GNEQ9Y223 722 aaKnown RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 DDX49Q9Y6V7 483 aaKnown RBP12.1□□□□□ -0.47
LINC01560-201ENST00000357412 ASTN1O14525 1302 aa12.1□□□□□ -0.47
LINC01560-201ENST00000357412 ALPK3Q96L96 1907 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 DCDC2CA8MYV0 355 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 HSPD1P10809 573 aaKnown RBP12.09□□□□□ -0.47
LINC01560-201ENST00000357412 ALAS1P13196 640 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 FPGSQ05932 587 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 MUM1L1Q5H9M0 696 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 GNASQ5JWF2 1037 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 TTBK2Q6IQ55 1244 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 ZNF589Q86UQ0 364 aaPredicted RBP12.09□□□□□ -0.47
LINC01560-201ENST00000357412 TICAM2Q86XR7 235 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 CDX2Q99626 313 aaPredicted RBP12.09□□□□□ -0.47
LINC01560-201ENST00000357412 TTYH1Q9H313 450 aaPredicted RBP12.09□□□□□ -0.47
LINC01560-201ENST00000357412 CYP39A1Q9NYL5 469 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 DNAH12Q6ZR08 3092 aa12.09□□□□□ -0.47
LINC01560-201ENST00000357412 A0A0U1RQG5 324 aaPredicted RBP12.08□□□□□ -0.48
LINC01560-201ENST00000357412 ASB14A6NK59 587 aa12.08□□□□□ -0.48
LINC01560-201ENST00000357412 ARVCFO00192 962 aa12.08□□□□□ -0.48
LINC01560-201ENST00000357412 TIMP1P01033 207 aa12.08□□□□□ -0.48
LINC01560-201ENST00000357412 ICAM1P05362 532 aa12.08□□□□□ -0.48
LINC01560-201ENST00000357412 PTGS1P23219 599 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms