RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 C1orf131Q8NDD1 294 aaKnown RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 NHEJ1Q9H9Q4 299 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 IDEP14735 1019 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 VAV2P52735 878 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 CHRNA2Q15822 529 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 KDM7AQ6ZMT4 941 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 KIAA1328Q86T90 577 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 SPATA4Q8NEY3 305 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 TTLL11Q8NHH1 800 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 NAPBQ9H115 298 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 RREB1Q92766 1687 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 SRRM3A6NNA2 597 aaPredicted RBP13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 ZNF263O14978 683 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 PRPF3O43395 683 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 IDH1O75874 414 aaKnown RBP13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 CAGE1Q8TC20 777 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 SAMM50Q9Y512 469 aa13.53□□□□□ -0.24
SMARCAL1-201ENST00000357276 KIF1CO43896 1103 aaKnown RBP13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 A1BGP04217 495 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 DNM2P50570 870 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 PMS1P54277 932 aaKnown RBP13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 IFIT5Q13325 482 aaKnown RBP13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 FIGNQ5HY92 759 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 HAUS3Q68CZ6 603 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 CCDC70Q6NSX1 233 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 IQCKQ8N0W5 287 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 TSGA10Q9BZW7 698 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 AGPAT5Q9NUQ2 364 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 GDAQ9Y2T3 454 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 CEP83Q9Y592 693 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 CAPN7Q9Y6W3 813 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 A0A1W2PQJ5 194 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 TOM1O60784 492 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 LCA5LO95447 670 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 CSB-PGBD3P0DP91 1061 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 HNRNPH3P31942 346 aaKnown RBP13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 ZBED6P86452 979 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 PTGDRQ13258 359 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 SEMA3FQ13275 785 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 CD302Q8IX05 232 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 CCDC82Q8N4S0 544 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 TRIM58Q8NG06 486 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 NUP58Q9BVL2 599 aa13.52□□□□□ -0.24
SMARCAL1-201ENST00000357276 TNS2Q63HR2 1409 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 MYO1FO00160 1098 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 NAP1L1P55209 391 aaKnown RBP13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 PLCB4Q15147 1175 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 TTC38Q5R3I4 469 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 SECISBP2LQ93073 1101 aaKnown RBP13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZKSCAN3Q9BRR0 538 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 EPN3Q9H201 632 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 STIM2Q9P246 746 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 PNPLA7Q6ZV29 1317 aa13.52□□□□□ -0.25
SMARCAL1-201ENST00000357276 TRIM49BA6NDI0 452 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 NDUFAB1O14561 156 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 KCNB1Q14721 858 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 METTL24Q5JXM2 366 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 MREGQ8N565 214 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZIM3Q96PE6 472 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 XBP1P17861 261 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 PDCLQ13371 301 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZNF174Q15697 407 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 TSR1Q2NL82 804 aaKnown RBP13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 TTI2Q6NXR4 508 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 SH2D4AQ9H788 454 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 RASSF9O75901 435 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 MBD4O95243 580 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 LSP1P33241 339 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 PHKA1P46020 1223 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 APBA1Q02410 837 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 NAA35Q5VZE5 725 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 CAPN6Q9Y6Q1 641 aa13.51□□□□□ -0.25
SMARCAL1-201ENST00000357276 MYH10P35580 1976 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 KLRC4O43908 158 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 TRAPPC10P48553 1259 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 PPARAQ07869 468 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 GLE1Q53GS7 698 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 TTC19Q6DKK2 380 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 C6orf89Q6UWU4 347 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 PIK3R5Q8WYR1 880 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 OSBPL9Q96SU4 736 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 RABEP2Q9H5N1 569 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 GDF3Q9NR23 364 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 ANKRD36CQ5JPF3 1778 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 PCDH11XQ9BZA7 1347 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 PCDH11YQ9BZA8 1340 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZNF233A6NK53 670 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 UQCRFS1P1P0C7P4 283 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 SMTNP53814 917 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 KIF5AQ12840 1032 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZSCAN29Q8IWY8 852 aaPredicted RBP13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 C4orf32Q8N8J7 132 aa13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 NOC3LQ8WTT2 800 aaKnown RBP13.5□□□□□ -0.25
SMARCAL1-201ENST00000357276 ZKSCAN4Q969J2 545 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms