RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 WTIPA6NIX2 430 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 B4DLN1 442 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 RPN1P04843 607 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 PARP1P09874 1014 aaKnown RBP9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 INHBEP58166 350 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 EVX2Q03828 476 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 SPAG1Q07617 926 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 DDR1Q08345 913 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 CRYMQ14894 314 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 JAKMIP2Q96AA8 810 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 MTRQ99707 1265 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 PHF20Q9BVI0 1012 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 PLA2G12BQ9BX93 195 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 AGPAT5Q9NUQ2 364 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 JAG2Q9Y219 1238 aa9.2□□□□□ -0.94
CDC42SE1-201ENST00000357235 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 IDEP14735 1019 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 GNAT2P19087 354 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 GGCXP38435 758 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 GYG1P46976 350 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 KLK7P49862 253 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 PMS1P54277 932 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 C2orf54Q08AI8 447 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 STIM1Q13586 685 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 PRPF38AQ8NAV1 312 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 GPKOWQ92917 476 aaPredicted RBP eCLIP9.19□□□□□ -0.945e-8■■□□□ 14
CDC42SE1-201ENST00000357235 ZNHIT6Q9NWK9 470 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 SLAIN2Q9P270 581 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 RWDD2AQ9UIY3 292 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 REXO2Q9Y3B8 237 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 CAPN7Q9Y6W3 813 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 ADAMTS3O15072 1205 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 CLSTN1O94985 981 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 TUBB2AQ13885 445 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 SMCR8Q8TEV9 937 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 TUBB2BQ9BVA1 445 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 POLD4Q9HCU8 107 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 WDR17Q8IZU2 1322 aa9.19□□□□□ -0.94
CDC42SE1-201ENST00000357235 A0A1B0GUA9 196 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 KRT86O43790 486 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 CXCR5P32302 372 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 IGHMBP2P38935 993 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC96Q2M329 555 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZKSCAN4Q969J2 545 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 LACRTQ9GZZ8 138 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 C4AP0C0L4 1744 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 C4BP0C0L5 1744 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 RTL9Q8NET4 1388 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 TMCO5BA8MYB1 307 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 USP17L21D6R901 530 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 MYBL2P10244 700 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 USP14P54578 494 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 NAP1L1P55209 391 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 SLC7A5Q01650 507 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 TBC1D8BQ0IIM8 1120 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 PREPLQ4J6C6 727 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 CCDC178Q5BJE1 867 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZNF658Q5TYW1 1059 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZNF526Q8TF50 670 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZNF512BQ96KM6 892 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 HAUS4Q9H6D7 363 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 CD248Q9HCU0 757 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 LIMA1Q9UHB6 759 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 MROH5Q6ZUA9 1318 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ANKRD33BA6NCL7 494 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 SEMA3EO15041 775 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 GTPBP6O43824 516 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 BMP15O95972 392 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 UBA7P41226 1012 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 MTIF2P46199 727 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ATP2C1P98194 919 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 AMPD2Q01433 879 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ADCY2Q08462 1091 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 SRBD1Q8N5C6 995 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 CSGALNACT2Q8N6G5 542 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 MB21D1Q8N884 522 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 SPATS2LQ9NUQ6 558 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ETAA1Q9NY74 926 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 SMARCAL1Q9NZC9 954 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 MYO1AQ9UBC5 1043 aa9.18□□□□□ -0.94
CDC42SE1-201ENST00000357235 ITIH6Q6UXX5 1313 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 PRPF3O43395 683 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 ZPR1O75312 459 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 SYF2O95926 243 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 HERVK_113P62684 666 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 TUBB4BP68371 445 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 TRIM14Q14142 442 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 SEC23AQ15436 765 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 IL17AQ16552 155 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 SND1Q7KZF4 910 aaKnown RBP eCLIP9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 TRAPPC11Q7Z392 1133 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 ANKRD13CQ8N6S4 541 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 ARMC2Q8NEN0 867 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 SH3GL3Q99963 347 aa9.17□□□□□ -0.94
CDC42SE1-201ENST00000357235 SELENOOQ9BVL4 669 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms