RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 PCDHA4Q9UN74 947 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 M0R2N6 131 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 PHACTR2O75167 634 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 PLEKP08567 350 aaPredicted RBP17.15■□□□□ 0.34
PTBP1-203ENST00000356948 TSPY3P0CV98 308 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 TSPY8P0CW00 308 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 GLIS3Q8NEA6 775 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 CAPZA3Q96KX2 299 aa17.15■□□□□ 0.34
PTBP1-203ENST00000356948 CCDC194A0A1B0GVG4 234 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 TXLNAP40222 546 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 TECP42680 631 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 GTF2A1P52655 376 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-203ENST00000356948 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-203ENST00000356948 SMCR8Q8TEV9 937 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-203ENST00000356948 ABCB6Q9NP58 842 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 SRGAP1Q7Z6B7 1085 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 SPATA31A5Q5VU36 1347 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 SPATA31A7Q8IWB4 1347 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 COL14A1Q05707 1796 aaKnown RBP17.14■□□□□ 0.33
PTBP1-203ENST00000356948 TRIM66O15016 1216 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 ZNF185O15231 689 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 PLCG1P19174 1290 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 PPP2R5BQ15173 497 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 DTHD1Q6ZMT9 781 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 ADSSL1Q8N142 457 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 ARFGAP3Q9NP61 516 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 ATP8A2Q9NTI2 1148 aa17.14■□□□□ 0.33
PTBP1-203ENST00000356948 BIN2Q9UBW5 565 aaPredicted RBP17.14■□□□□ 0.33
PTBP1-203ENST00000356948 STXBP3O00186 592 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 CCNT1O60563 726 aaKnown RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 CCDC178Q5BJE1 867 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 JAKMIP3Q5VZ66 844 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 CLEC4GQ6UXB4 293 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 GSPT2Q8IYD1 628 aaKnown RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 ARHGEF1Q92888 912 aaKnown RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 PDE11AQ9HCR9 933 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 CDC23Q9UJX2 597 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 FRMPD2Q68DX3 1309 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 LRRC10BA6NIK2 292 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 KRT26Q7Z3Y9 468 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 PCNTO95613 3336 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 CAPN2P17655 700 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 IBSPP21815 317 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 HERVK_113P62684 666 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 RAD51AP2Q09MP3 1159 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 CNGA4Q8IV77 575 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 TRIM47Q96LD4 638 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 DUSP9Q99956 384 aaKnown RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 RASSF4Q9H2L5 321 aa17.13■□□□□ 0.33
PTBP1-203ENST00000356948 ARPP21Q9UBL0 812 aaPredicted RBP17.13■□□□□ 0.33
PTBP1-203ENST00000356948 SCN7AQ01118 1682 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 ROBO1Q9Y6N7 1651 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 TUBB4AP04350 444 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 ATP1A1P05023 1023 aaKnown RBP17.12■□□□□ 0.33
PTBP1-203ENST00000356948 UBA7P41226 1012 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 ANKRD40Q6AI12 368 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 CCDC155Q8N6L0 562 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 RABGGTAQ92696 567 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.12■□□□□ 0.33
PTBP1-203ENST00000356948 CASZ1Q86V15 1759 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 EPHB6O15197 1021 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 LDHBP07195 334 aaKnown RBP17.12■□□□□ 0.33
PTBP1-203ENST00000356948 MB21D1Q8N884 522 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 CTAGE1Q96RT6 745 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 CTAGE9A4FU28 777 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 GOLGA6L9A6NEM1 432 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 KLRF2D3W0D1 207 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 CYP2C19P33261 490 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 UBXN6Q9BZV1 441 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 SLC39A2Q9NP94 309 aa17.12■□□□□ 0.33
PTBP1-203ENST00000356948 RASA1P20936 1047 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 GOLGA6L1Q8N7Z2 621 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 NUDT12Q9BQG2 462 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 EPN1Q9Y6I3 576 aaPredicted RBP17.11■□□□□ 0.33
PTBP1-203ENST00000356948 IRS2Q9Y4H2 1338 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 NDUFA10O95299 355 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 C8orf37Q96NL8 207 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 PSMB7Q99436 277 aa17.11■□□□□ 0.33
PTBP1-203ENST00000356948 ZPR1O75312 459 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 BEND6Q5SZJ8 279 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-203ENST00000356948 DYMQ7RTS9 669 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 POTEDQ86YR6 584 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 COA7Q96BR5 231 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 PIGSQ96S52 555 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 FKBP15Q5T1M5 1219 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 MMS19Q96T76 1030 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 SMARCAL1Q9NZC9 954 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 F8W031 263 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-203ENST00000356948 FLT1P17948 1338 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 TXKP42681 527 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 SLC10A5Q5PT55 438 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 TTI2Q6NXR4 508 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 ZNF444Q8N0Y2 327 aaPredicted RBP17.1■□□□□ 0.33
PTBP1-203ENST00000356948 ZNF507Q8TCN5 953 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
PTBP1-203ENST00000356948 USP17L5A8MUK1 530 aa17.09■□□□□ 0.33
PTBP1-203ENST00000356948 KIF5BP33176 963 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms