RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 THAP12O43422 761 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 DEPTORQ8TB45 409 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 LINS1Q8NG48 757 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 UBN1Q9NPG3 1134 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 U2AF1L4Q8WU68 220 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 UHRF1BP1Q6BDS2 1440 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 hCG_1642624A0A1W2PR95 340 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 PRPSAP1Q14558 356 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 LRRC59Q96AG4 307 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 SLF1Q9BQI6 1058 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 RIC8AQ9NPQ8 531 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 ANGPTL3Q9Y5C1 460 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 HIBADHP31937 336 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 TRIM42Q8IWZ5 723 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 BABAM1Q9NWV8 329 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 NVLO15381 856 aaKnown RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 IRX1P78414 480 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 ARHGAP18Q8N392 663 aa12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
SPTBN1-202ENST00000356805 ITGA6P23229 1130 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 IFT88Q13099 833 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 SCHIP1Q9P0W5 487 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 PTPN22Q9Y2R2 807 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 MAD1L1Q9Y6D9 718 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 EIF3BP55884 814 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 PUM3Q15397 648 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 MYLK4Q86YV6 388 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 NLRC4Q9NPP4 1024 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ADGRL1O94910 1474 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 IL9RQ01113 521 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 NLRX1Q86UT6 975 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ANKRD35Q8N283 1001 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 BLMP54132 1417 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 KCNK3O14649 394 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 XPAP23025 273 aaPredicted RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 LARGE2Q8N3Y3 721 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 C8orf58Q8NAV2 365 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 RGS12O14924 1447 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 TTC4O95801 387 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ANGEL1Q9UNK9 670 aaKnown RBP12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 FAM135BQ49AJ0 1406 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 FRMD3A2A2Y4 597 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 KRIT1O00522 736 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 GAS7O60861 476 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ATP5HO75947 161 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ATICP31939 592 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 RINT1Q6NUQ1 792 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 MLXIPQ9HAP2 919 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ITM2BQ9Y287 266 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 CD109Q6YHK3 1445 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 LMNB1P20700 586 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 LIG4P49917 911 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 RETREG2Q8NC44 543 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 TEKT1Q969V4 418 aa12.55□□□□□ -0.4
SPTBN1-202ENST00000356805 IQGAP2Q13576 1575 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 IKBKBO14920 756 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 GUCY2CP25092 1073 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 GADL1Q6ZQY3 521 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 H0YIN7 160 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 TOM1O60784 492 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 FBXW4P57775 412 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 EMBQ6PCB8 327 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 MYL10Q9BUA6 226 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 SUFUQ9UMX1 484 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 KDRP35968 1356 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 TNNC2P02585 160 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 PIK3CAP42336 1068 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 IQCB1Q15051 598 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ANKRD20A4Q4UJ75 823 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ANKRD20A8PQ5CZ79 823 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ANKRD20A2Q5SQ80 823 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ANKRD20A1Q5TYW2 823 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 MCUQ8NE86 351 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ARMC2Q8NEN0 867 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 NLRP7Q8WX94 980 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 FAM89AQ96GI7 184 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 PPP1R13BQ96KQ4 1090 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 LRWD1Q9UFC0 647 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ANGPTL2Q9UKU9 493 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 GOLGA8CPA6NN73 597 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 VAMP4O75379 141 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 ATP1A2P50993 1020 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 CABP7Q86V35 215 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 EPS15L1Q9UBC2 864 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 A0A1W2PQ27 194 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 A0A1W2PQ64 194 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 A0A1W2PQD8 194 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 CFAP61Q8NHU2 1237 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 PPWD1Q96BP3 646 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 BUB1O43683 1085 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 PRDM1O75626 825 aa12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 DLATP10515 647 aaKnown RBP12.54□□□□□ -0.4
SPTBN1-202ENST00000356805 HADHQ16836 314 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms