RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SPDYE6P0CI01 402 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 XRCC5P13010 732 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SDCCAG3Q96C92 435 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TRERF1Q96PN7 1200 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ATP10DQ9P241 1426 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PAK2Q13177 524 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 C1orf228Q6PIY5 440 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 NELFCDQ8IXH7 590 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 DIS3L2Q8IYB7 885 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 RYBPQ8N488 228 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PSTPIP2Q9H939 334 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 MORC2Q9Y6X9 1032 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 A0A1B0GVL5 298 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF233A6NK53 670 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 EIF3CLB5ME19 914 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ERVV-2B6SEH9 535 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CEP104O60308 925 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ABCD1P33897 745 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 MICALL1Q8N3F8 863 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 EIF3CQ99613 913 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 RAB17Q9H0T7 212 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ADD3Q9UEY8 706 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SLC12A6Q9UHW9 1150 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TRIM35Q9UPQ4 493 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TNNQ9UQP3 1299 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 RABGAP1Q9Y3P9 1069 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 A0A1W2PP64 1363 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 KCNJ6P48051 423 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 KIAA1841Q6NSI8 718 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ELMOD1Q8N336 334 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ATP6V0A1Q93050 837 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 LSM14BQ9BX40 385 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SUGCTQ9HAC7 445 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SORBS3O60504 671 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CHMLP26374 656 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CDC25BP30305 580 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CYP2J2P51589 502 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 RPS6KA1Q15418 735 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 DENND2CQ68D51 928 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 MIS18BP1Q6P0N0 1132 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 NLGN1Q8N2Q7 840 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 MLKLQ8NB16 471 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ZSCAN10Q96SZ4 725 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 EFCC1Q9HA90 598 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 MYO1AQ9UBC5 1043 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ANGPTL3Q9Y5C1 460 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 NRXN1Q9ULB1 1477 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SOS2Q07890 1332 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ZNF532Q9HCE3 1301 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PSDA5PKW4 1024 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 MGEA5O60502 916 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CD2BP2O95400 341 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 IREB2P48200 963 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CTSWP56202 376 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PPFIA1Q13136 1202 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 ZBTB33Q86T24 672 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 CCDC170Q8IYT3 715 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SCYL1Q96KG9 808 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TM6SF1Q9BZW5 370 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TRPC5Q9UL62 973 aaPredicted RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 SLC27A2O14975 620 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 IGBP1P78318 339 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 GTF2IP78347 998 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PRR16Q569H4 304 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 DYMQ7RTS9 669 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TDRD7Q8NHU6 1098 aaKnown RBP6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PLEKHF1Q96S99 279 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TTC1Q99614 292 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 TRIM31Q9BZY9 425 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 PPME1Q9Y570 386 aa6.07□□□□□ -1.44
PTPRD-202ENST00000356435 GOLGA8QA0A0J9YX86 632 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 GOLGA8OA6NCC3 632 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SMCO2A6NFE2 343 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 GOLGA8NF8WBI6 632 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 LRMPQ12912 555 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 CFAP221Q4G0U5 840 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 GALNT17Q6IS24 598 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SCYL2Q6P3W7 929 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SNX25Q9H3E2 840 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 POLKQ9UBT6 870 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 CCND2P30279 289 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 CERKLQ49MI3 558 aaPredicted RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 MAP7D3Q8IWC1 876 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 PNPLA6Q8IY17 1366 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 RSRC2Q7L4I2 434 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 TMTC1Q8IUR5 882 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 CTAGE3PQ8IX95 158 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 ARHGEF2Q92974 986 aaKnown RBP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 HDAC11Q96DB2 347 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 AKT3Q9Y243 479 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 DDAH1O94760 285 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 TROVE2P10155 538 aaKnown RBP eCLIP6.06□□□□□ -1.44
PTPRD-202ENST00000356435 BTDP43251 543 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 IRX4P78413 519 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 RAD51AP2Q09MP3 1159 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 NAA25Q14CX7 972 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 LONRF2Q1L5Z9 754 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 SUPT20HL1Q3ZLR7 823 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 GANCQ8TET4 914 aa6.06□□□□□ -1.44
PTPRD-202ENST00000356435 U2AF1L4Q8WU68 220 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms