RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 BRMS1Q9HCU9 246 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 BARHL2Q9NY43 387 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 IFNKQ9P0W0 207 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 PCDHA4Q9UN74 947 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 NKRFO15226 690 aaKnown RBP eCLIP15.81■□□□□ 0.125e-7■■□□□ 12
LSS-201ENST00000356396 NDUFB10O96000 172 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 POLD1P28340 1107 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 DPYDQ12882 1025 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 RASA3Q14644 834 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 FANCLQ9NW38 375 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 NRXN2Q9P2S2 1712 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
LSS-201ENST00000356396 INPP5BP32019 993 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 STAT3P40763 770 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 GMPSP49915 693 aaPredicted RBP15.8■□□□□ 0.12
LSS-201ENST00000356396 MICALL2Q8IY33 904 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 MED15Q96RN5 788 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 SAMSN1Q9NSI8 373 aaKnown RBP15.8■□□□□ 0.12
LSS-201ENST00000356396 EDIL3O43854 480 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 STX1AQ16623 288 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 SOGA3Q5TF21 947 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 TMC4Q7Z404 712 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 NAP1L5Q96NT1 182 aaPredicted RBP15.8■□□□□ 0.12
LSS-201ENST00000356396 GDAQ9Y2T3 454 aa15.8■□□□□ 0.12
LSS-201ENST00000356396 ZNF541Q9H0D2 1346 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 LTBP1Q14766 1721 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 ZNF543Q08ER8 600 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 NBPF12Q5TAG4 269 aaPredicted RBP15.79■□□□□ 0.12
LSS-201ENST00000356396 HPSEQ9Y251 543 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 SSBP05455 408 aaKnown RBP eCLIP15.79■□□□□ 0.12
LSS-201ENST00000356396 CC2D2BQ6DHV5 1058 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 TRMT1Q9NXH9 659 aaKnown RBP15.79■□□□□ 0.12
LSS-201ENST00000356396 ZNRF3Q9ULT6 936 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 PCDHA1Q9Y5I3 950 aa15.79■□□□□ 0.12
LSS-201ENST00000356396 CUTAO60888 179 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 POSTNQ15063 836 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 DYMQ7RTS9 669 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 ZNF287Q9HBT7 754 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 SRPRBQ9Y5M8 271 aaKnown RBP15.78■□□□□ 0.12
LSS-201ENST00000356396 A0A1W2PQ27 194 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 A0A1W2PQ64 194 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 A0A1W2PQD8 194 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 TRIM49BA6NDI0 452 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 EPS15P42566 896 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 DNTTIP2Q5QJE6 756 aaKnown RBP15.78■□□□□ 0.12
LSS-201ENST00000356396 XPO4Q9C0E2 1151 aaKnown RBP15.78■□□□□ 0.12
LSS-201ENST00000356396 MAN1B1Q9UKM7 699 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 PPP6R2O75170 966 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 DDNO94850 711 aaPredicted RBP15.78■□□□□ 0.12
LSS-201ENST00000356396 LETM1O95202 739 aaPredicted RBP15.78■□□□□ 0.12
LSS-201ENST00000356396 CFBP00751 764 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 JMYQ8N9B5 988 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 TRPM4Q8TD43 1214 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 WNK4Q96J92 1243 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 MYOZ2Q9NPC6 264 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
LSS-201ENST00000356396 TBC1D7Q9P0N9 293 aa15.78■□□□□ 0.12
LSS-201ENST00000356396 ACTN4O43707 911 aaKnown RBP15.77■□□□□ 0.12
LSS-201ENST00000356396 CDC37Q16543 378 aaPredicted RBP15.77■□□□□ 0.12
LSS-201ENST00000356396 CIAPIN1Q6FI81 312 aa15.77■□□□□ 0.12
LSS-201ENST00000356396 RBM43Q6ZSC3 357 aaKnown RBP15.77■□□□□ 0.12
LSS-201ENST00000356396 MOB2Q70IA6 237 aa15.77■□□□□ 0.12
LSS-201ENST00000356396 GLIS3Q8NEA6 775 aa15.77■□□□□ 0.12
LSS-201ENST00000356396 CPLX3Q8WVH0 158 aa15.77■□□□□ 0.12
LSS-201ENST00000356396 CNKSR2Q8WXI2 1034 aa15.77■□□□□ 0.12
LSS-201ENST00000356396 FAM13BQ9NYF5 915 aa15.77■□□□□ 0.12
LSS-201ENST00000356396 ROBO3Q96MS0 1386 aa15.77■□□□□ 0.11
LSS-201ENST00000356396 HTTP42858 3142 aa15.77■□□□□ 0.11
LSS-201ENST00000356396 CEP57L1Q8IYX8 460 aa15.77■□□□□ 0.11
LSS-201ENST00000356396 REXO1Q8N1G1 1221 aaKnown RBP15.77■□□□□ 0.11
LSS-201ENST00000356396 NOL7Q9UMY1 257 aaKnown RBP15.77■□□□□ 0.11
LSS-201ENST00000356396 MEIS1O00470 390 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 FHDC1Q9C0D6 1143 aaPredicted RBP15.76■□□□□ 0.11
LSS-201ENST00000356396 TMOD2Q9NZR1 351 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 CNOT7Q9UIV1 285 aaKnown RBP15.76■□□□□ 0.11
LSS-201ENST00000356396 SERPINA10Q9UK55 444 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 MARCH6O60337 910 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 ZNF75DP51815 510 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 ZSCAN30Q86W11 494 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 CACTINQ8WUQ7 758 aaKnown RBP15.76■□□□□ 0.11
LSS-201ENST00000356396 PAGE5Q96GU1 130 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 FEZ1Q99689 392 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 ANO10Q9NW15 660 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 R3HCC1Q9Y3T6 440 aaKnown RBP15.76■□□□□ 0.11
LSS-201ENST00000356396 CNTNAP1P78357 1384 aa15.76■□□□□ 0.11
LSS-201ENST00000356396 PES1O00541 588 aaKnown RBP15.75■□□□□ 0.11
LSS-201ENST00000356396 VIL1P09327 827 aaKnown RBP15.75■□□□□ 0.11
LSS-201ENST00000356396 RTKN2Q8IZC4 609 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 CHMP2AO43633 222 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 PCP11498 1178 aaKnown RBP15.75■□□□□ 0.11
LSS-201ENST00000356396 TMC6Q7Z403 805 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 GMLQ99445 158 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 ZNF341Q9BYN7 854 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 HSD3B7Q9H2F3 369 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 KANSL2Q9H9L4 492 aa15.75■□□□□ 0.11
LSS-201ENST00000356396 IGKV6D-41A0A0C4DH26 115 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms