RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PLIN4Q96Q06 1357 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 DNAJC25-GNG10A0A024R161 153 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 TLE2Q04725 743 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 ACVR2BQ13705 512 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 MCMDC2Q4G0Z9 681 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 C1orf53Q5VUE5 145 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 RCSD1Q6JBY9 416 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 VTI1AQ96AJ9 217 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 TSEN34Q9BSV6 310 aaKnown RBP12.61□□□□□ -0.39
CAPN3-204ENST00000356316 ABHD16BQ9H3Z7 469 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 RWDD1Q9H446 243 aaPredicted RBP12.61□□□□□ -0.39
CAPN3-204ENST00000356316 ACAD9Q9H845 621 aa12.61□□□□□ -0.39
CAPN3-204ENST00000356316 PLA2G6O60733 806 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 DUSP11O75319 330 aaKnown RBP12.6□□□□□ -0.39
CAPN3-204ENST00000356316 SNAI1O95863 264 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-204ENST00000356316 ACLYP53396 1101 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 SNX17Q15036 470 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 ALX1Q15699 326 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 TKFCQ3LXA3 575 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 RRP12Q5JTH9 1297 aaKnown RBP12.6□□□□□ -0.39
CAPN3-204ENST00000356316 KCTD1Q719H9 257 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 BADQ92934 168 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 RILPL2Q969X0 211 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 YTHDC1Q96MU7 727 aaKnown RBP12.6□□□□□ -0.39
CAPN3-204ENST00000356316 INCENPQ9NQS7 918 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.6□□□□□ -0.39
CAPN3-204ENST00000356316 ANAPC4Q9UJX5 808 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 SALL3Q9BXA9 1300 aa12.6□□□□□ -0.39
CAPN3-204ENST00000356316 A0A1W2PQ45 241 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 A0A1W2PQY0 241 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 MOXD2PA6NHM9 499 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 DCDC2CA8MYV0 355 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 POTEB2H3BUK9 544 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 PQBP1O60828 265 aaKnown RBP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 FGAP02671 866 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 CLTBP09497 229 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 ALAS1P13196 640 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 RAG1P15918 1043 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 MFAP1P55081 439 aaKnown RBP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 KCNA10Q16322 511 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 CCDC144BQ3MJ40 725 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 VPS53Q5VIR6 699 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 B4GALNT3Q6L9W6 998 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 CCDC174Q6PII3 467 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 NOL8Q76FK4 1167 aaKnown RBP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 Q7L0L9 218 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 PCSK9Q8NBP7 692 aaKnown RBP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 AGBL1Q96MI9 1066 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 GLT1D1Q96MS3 346 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 TRERF1Q96PN7 1200 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 STARD7Q9NQZ5 370 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 RNF146Q9NTX7 359 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 TMEM39AQ9NV64 488 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.59□□□□□ -0.39
CAPN3-204ENST00000356316 SYNRGQ9UMZ2 1314 aa12.59□□□□□ -0.39
CAPN3-204ENST00000356316 ASB14A6NK59 587 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 ORC4O43929 436 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 NMT2O60551 498 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 ADAMTS4O75173 837 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 CCDC96Q2M329 555 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 GNASQ5JWF2 1037 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 ARMCX2Q7L311 632 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 CCDC144CPQ8IYA2 1237 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 DCAF4Q8WV16 495 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 LENG1Q96BZ8 264 aaPredicted RBP12.58□□□□□ -0.4
CAPN3-204ENST00000356316 PDLIM7Q9NR12 457 aa12.58□□□□□ -0.4
CAPN3-204ENST00000356316 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 HSPD1P10809 573 aaKnown RBP12.57□□□□□ -0.4
CAPN3-204ENST00000356316 TOP1P11387 765 aaKnown RBP12.57□□□□□ -0.4
CAPN3-204ENST00000356316 SHHQ15465 462 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 MFSD6Q6ZSS7 791 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 SH3RF1Q7Z6J0 888 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 KLHDC9Q8NEP7 349 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 TRIM43Q96BQ3 446 aaPredicted RBP12.57□□□□□ -0.4
CAPN3-204ENST00000356316 FAM227BQ96M60 508 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 TOX2Q96NM4 488 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 A1CFQ9NQ94 594 aaKnown RBP12.57□□□□□ -0.4
CAPN3-204ENST00000356316 MTMR10Q9NXD2 777 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 CCPG1Q9ULG6 757 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 STXBP5LQ9Y2K9 1186 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 MROH7Q68CQ1 1323 aa12.57□□□□□ -0.4
CAPN3-204ENST00000356316 A0A0D9SFI3 127 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 FOXP2O15409 715 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 FGRP09769 529 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 PCP11498 1178 aaKnown RBP12.56□□□□□ -0.4
CAPN3-204ENST00000356316 GJA9P57773 515 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 SNAP25P60880 206 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 CNTN2Q02246 1040 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 TNFAIP2Q03169 654 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 NMIQ13287 307 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-204ENST00000356316 ZNF697Q5TEC3 545 aa12.56□□□□□ -0.4
CAPN3-204ENST00000356316 FAM109BQ6ICB4 259 aaPredicted RBP12.56□□□□□ -0.4
CAPN3-204ENST00000356316 FAM133AQ8N9E0 248 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms