RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 MARCH6O60337 910 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 USO1O60763 962 aaKnown RBP14.92□□□□□ -0.02
NCDN-201ENST00000356090 PLEKP08567 350 aaPredicted RBP14.92□□□□□ -0.02
NCDN-201ENST00000356090 MCM3P25205 808 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 HERVK_113P62684 666 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 TFAP4Q01664 338 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 PDXDC2PQ6P474 469 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 DYMQ7RTS9 669 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 EHBP1Q8NDI1 1231 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 CNOT6LQ96LI5 555 aaKnown RBP14.92□□□□□ -0.02
NCDN-201ENST00000356090 MLXIPQ9HAP2 919 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 SLC39A2Q9NP94 309 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 DISC1Q9NRI5 854 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 PNPLA7Q6ZV29 1317 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 EXOC5O00471 708 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 KCNQ4P56696 695 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 PPP2R5BQ15173 497 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 EZH2Q15910 746 aaKnown RBP14.92□□□□□ -0.02
NCDN-201ENST00000356090 KCTD16Q68DU8 428 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 SMIM5Q71RC9 77 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 BRINP3Q76B58 766 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 CACNA2D4Q7Z3S7 1137 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 STAG2Q8N3U4 1231 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 CRNKL1Q9BZJ0 848 aaKnown RBP14.92□□□□□ -0.02
NCDN-201ENST00000356090 TMEM60Q9H2L4 133 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 PSD3Q9NYI0 1048 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 ITIH6Q6UXX5 1313 aa14.92□□□□□ -0.02
NCDN-201ENST00000356090 MYO5AQ9Y4I1 1855 aaKnown RBP14.91□□□□□ -0.02
NCDN-201ENST00000356090 USP54Q70EL1 1684 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 RCCD1A6NED2 376 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 BUB1O43683 1085 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 MOCS3O95396 460 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 MYBL2P10244 700 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 LIG3P49916 1009 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 PTPROQ16827 1216 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 IFT81Q8WYA0 676 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
NCDN-201ENST00000356090 EHD4Q9H223 541 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 TUBBP07437 444 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 CALML3P27482 149 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 DNM2P50570 870 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 NKX1-1Q15270 411 aaPredicted RBP14.91□□□□□ -0.02
NCDN-201ENST00000356090 IQCEQ6IPM2 695 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 DZIP1Q86YF9 867 aaKnown RBP14.91□□□□□ -0.02
NCDN-201ENST00000356090 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 CDK5RAP3Q96JB5 506 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 PYM1Q9BRP8 204 aaKnown RBP14.91□□□□□ -0.02
NCDN-201ENST00000356090 RAD21O60216 631 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 CCNT1O60563 726 aaKnown RBP14.91□□□□□ -0.02
NCDN-201ENST00000356090 TACC1O75410 805 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 FCER1AP12319 257 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 ATP1A2P50993 1020 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 E2F4Q16254 413 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 HPCAL4Q9UM19 191 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 SAMM50Q9Y512 469 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 FAM205AQ6ZU69 1335 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 CNTNAP5Q8WYK1 1306 aa14.91□□□□□ -0.02
NCDN-201ENST00000356090 USP17L8P0C7I0 530 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 IBSPP21815 317 aaPredicted RBP14.9□□□□□ -0.02
NCDN-201ENST00000356090 CT47A1Q5JQC4 288 aaPredicted RBP14.9□□□□□ -0.02
NCDN-201ENST00000356090 TRAPPC11Q7Z392 1133 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 NUTM2BA6NNL0 878 aaPredicted RBP14.9□□□□□ -0.02
NCDN-201ENST00000356090 NUTM2EB1AL46 878 aaPredicted RBP14.9□□□□□ -0.02
NCDN-201ENST00000356090 H0YHG0 523 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 NCK2O43639 380 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 PRDX5P30044 214 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 TECP42680 631 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 GTF2A1P52655 376 aaPredicted RBP14.9□□□□□ -0.02
NCDN-201ENST00000356090 ADSSL1Q8N142 457 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 COG1Q8WTW3 980 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 ZHX3Q9H4I2 956 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 NLRC4Q9NPP4 1024 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 MKRN1Q9UHC7 482 aaKnown RBP14.9□□□□□ -0.02
NCDN-201ENST00000356090 ATRNO75882 1429 aa14.9□□□□□ -0.02
NCDN-201ENST00000356090 PDE2AO00408 941 aaPredicted RBP14.89□□□□□ -0.03
NCDN-201ENST00000356090 PAFAH1B1P43034 410 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 AMPD2Q01433 879 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.89□□□□□ -0.03
NCDN-201ENST00000356090 RRAGAQ7L523 313 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 IRF2BP1Q8IU81 584 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 BCAS4Q8TDM0 211 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 HDAC7Q8WUI4 952 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 KIF1AQ12756 1690 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 C4AP0C0L4 1744 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 C4BP0C0L5 1744 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 USP17L3A6NCW0 530 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 USP17L4A6NCW7 530 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 PLCG1P19174 1290 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 LONP1P36776 959 aaKnown RBP14.89□□□□□ -0.03
NCDN-201ENST00000356090 TXKP42681 527 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 NAPAP54920 295 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 FUT2Q10981 343 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 NFRKBQ6P4R8 1299 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 USP17L1Q7RTZ2 530 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 CABP7Q86V35 215 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 SAP30BPQ9UHR5 308 aaKnown RBP14.89□□□□□ -0.03
NCDN-201ENST00000356090 DDAH1O94760 285 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 TSPY3P0CV98 308 aa14.89□□□□□ -0.03
NCDN-201ENST00000356090 TSPY8P0CW00 308 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms