RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SLC38A10Q9HBR0 1119 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 VPS54Q9P1Q0 977 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 PCDHB4Q9Y5E5 795 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 IGHDP01880 384 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 HLA-DPA1P20036 260 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 GARSP41250 739 aaKnown RBP18.86■□□□□ 0.61
COL27A1-201ENST00000356083 NAA35Q5VZE5 725 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 METTL23Q86XA0 190 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 CABP7Q86V35 215 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 PDCD6IPQ8WUM4 868 aaKnown RBP18.86■□□□□ 0.61
COL27A1-201ENST00000356083 PPP2R5EQ16537 467 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 ZNF148Q9UQR1 794 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 NEMP1O14524 444 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 KIAA0825Q8IV33 1275 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 SLC12A6Q9UHW9 1150 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 XRCC5P13010 732 aaKnown RBP18.86■□□□□ 0.61
COL27A1-201ENST00000356083 EEF2KMTQ96G04 330 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 SLF1Q9BQI6 1058 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 C1orf112Q9NSG2 853 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 OTUD7BQ6GQQ9 843 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 LRRC47Q8N1G4 583 aaKnown RBP18.85■□□□□ 0.61
COL27A1-201ENST00000356083 FRMD3A2A2Y4 597 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 ESRRBO95718 433 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 ZSCAN20P17040 1043 aaPredicted RBP18.85■□□□□ 0.61
COL27A1-201ENST00000356083 ATP1A2P50993 1020 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 EEPD1Q7L9B9 569 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 ZMAT2Q96NC0 199 aaKnown RBP18.85■□□□□ 0.61
COL27A1-201ENST00000356083 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.85■□□□□ 0.61
COL27A1-201ENST00000356083 KCNJ14Q9UNX9 436 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 GPBP1Q86WP2 473 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 PIP4K2CQ8TBX8 421 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 FTOQ9C0B1 505 aaKnown RBP eCLIP18.85■□□□□ 0.619e-7■■■□□ 16.9
COL27A1-201ENST00000356083 SNX25Q9H3E2 840 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 MAP3K7O43318 606 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 POLA2Q14181 598 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 CAPRIN1Q14444 709 aaKnown RBP18.85■□□□□ 0.61
COL27A1-201ENST00000356083 NUP58Q9BVL2 599 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 KRIT1O00522 736 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 TRPA1O75762 1119 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 BBS5Q8N3I7 341 aa18.85■□□□□ 0.61
COL27A1-201ENST00000356083 CEP19Q96LK0 163 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 MAST3O60307 1309 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 EVI5O60447 810 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 PDE6CP51160 858 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 PDE1BQ01064 536 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 KCNA1Q09470 495 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 AKAP4Q5JQC9 854 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 IFIH1Q9BYX4 1025 aaKnown RBP18.84■□□□□ 0.61
COL27A1-201ENST00000356083 RNF40O75150 1001 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 PSMD2Q13200 908 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 RASSF4Q9H2L5 321 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 ZC4H2Q9NQZ6 224 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 PCDHA12Q9UN75 941 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 TROQ12816 1431 aaPredicted RBP18.84■□□□□ 0.61
COL27A1-201ENST00000356083 MARK3P27448 753 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 NLRP7Q8WX94 980 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 CLTAP09496 248 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 DAB2P98082 770 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 ASPHQ12797 758 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 WHAMMP3Q1A5X7 153 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 ALDH1B1P30837 517 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 PEX19P40855 299 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 ADCY1Q08828 1119 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 CCDC157Q569K6 752 aa18.84■□□□□ 0.61
COL27A1-201ENST00000356083 ZC3H12BQ5HYM0 836 aaKnown RBP18.84■□□□□ 0.61
COL27A1-201ENST00000356083 G3BP2Q9UN86 482 aaKnown RBP18.84■□□□□ 0.61
COL27A1-201ENST00000356083 INHBAP08476 426 aa18.83■□□□□ 0.61
COL27A1-201ENST00000356083 OSTNP61366 133 aa18.83■□□□□ 0.61
COL27A1-201ENST00000356083 GPAA1O43292 621 aa18.83■□□□□ 0.61
COL27A1-201ENST00000356083 RNF219Q5W0B1 726 aaPredicted RBP18.83■□□□□ 0.61
COL27A1-201ENST00000356083 NUDCD3Q8IVD9 361 aa18.83■□□□□ 0.61
COL27A1-201ENST00000356083 SNX19Q92543 992 aa18.83■□□□□ 0.61
COL27A1-201ENST00000356083 HIF1AQ16665 826 aa18.83■□□□□ 0.61
COL27A1-201ENST00000356083 CCDC124Q96CT7 223 aaKnown RBP18.83■□□□□ 0.61
COL27A1-201ENST00000356083 PDE6BP35913 854 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 PPP1R2P41236 205 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 DYNLT1P63172 113 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 MTX1Q13505 466 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 RFX6Q8HWS3 928 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 YWHAGP61981 247 aaKnown RBP eCLIP18.83■□□□□ 0.6
COL27A1-201ENST00000356083 SPICE1Q8N0Z3 855 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 REXO1Q8N1G1 1221 aaKnown RBP18.83■□□□□ 0.6
COL27A1-201ENST00000356083 PPHLN1Q8NEY8 458 aaKnown RBP18.83■□□□□ 0.6
COL27A1-201ENST00000356083 BTN2A2Q8WVV5 523 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 DPH5Q9H2P9 285 aa18.83■□□□□ 0.6
COL27A1-201ENST00000356083 SUPT20HQ8NEM7 779 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 M0R2C6 588 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 BFSP1Q12934 665 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 FAM178BQ8IXR5 827 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 POLR3CQ9BUI4 534 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 INO80B-WBP1J3KQ70 363 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 ACTN1P12814 892 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 SNX1Q13596 522 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 TRMT44Q8IYL2 757 aaKnown RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 CSRNP1Q96S65 589 aa18.82■□□□□ 0.6
COL27A1-201ENST00000356083 INO80BQ9C086 356 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 CTNNA1P35221 906 aaKnown RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 TTC19Q6DKK2 380 aaPredicted RBP18.82■□□□□ 0.6
COL27A1-201ENST00000356083 IFNLR1Q8IU57 520 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms