RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 PCDHA6Q9UN73 950 aa15.61■□□□□ 0.09
HOXA1-202ENST00000355633 PCDHA8Q9Y5H6 950 aa15.61■□□□□ 0.09
HOXA1-202ENST00000355633 PHIPQ8WWQ0 1821 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 CCDC194A0A1B0GVG4 234 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 WDR46O15213 610 aaKnown RBP15.6■□□□□ 0.09
HOXA1-202ENST00000355633 ADCY7P51828 1080 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 PTPAQ15257 358 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 PCDHB6Q9Y5E3 794 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 TRIM75PA6NK02 468 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 TRAPPC10P48553 1259 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 SNAP25P60880 206 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 MAP3K9P80192 1104 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 FBXO11Q86XK2 927 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 JMYQ8N9B5 988 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 SYAP1Q96A49 352 aaPredicted RBP15.6■□□□□ 0.09
HOXA1-202ENST00000355633 AMNQ9BXJ7 453 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 TMEM63CQ9P1W3 806 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 PCDHA7Q9UN72 937 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 CEP131Q9UPN4 1083 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 PCDHA1Q9Y5I3 950 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 ZHX2Q9Y6X8 837 aa15.6■□□□□ 0.09
HOXA1-202ENST00000355633 PAPPA2Q9BXP8 1791 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 PPP6R2O75170 966 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 IREB2P48200 963 aaKnown RBP15.59■□□□□ 0.09
HOXA1-202ENST00000355633 BACE1P56817 501 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 KRT25Q7Z3Z0 450 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 KIFC2Q96AC6 838 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 CLEC11AQ9Y240 323 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 CSADQ9Y600 493 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 OTOFQ9HC10 1997 aa15.59■□□□□ 0.09
HOXA1-202ENST00000355633 MARCKSP29966 332 aaPredicted RBP15.58■□□□□ 0.09
HOXA1-202ENST00000355633 VGLL4Q14135 290 aa15.58■□□□□ 0.09
HOXA1-202ENST00000355633 TTC38Q5R3I4 469 aa15.58■□□□□ 0.09
HOXA1-202ENST00000355633 ADALQ6DHV7 355 aa15.58■□□□□ 0.09
HOXA1-202ENST00000355633 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.58■□□□□ 0.09
HOXA1-202ENST00000355633 REXO1Q8N1G1 1221 aaKnown RBP15.58■□□□□ 0.09
HOXA1-202ENST00000355633 RIC8AQ9NPQ8 531 aa15.58■□□□□ 0.09
HOXA1-202ENST00000355633 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.58■□□□□ 0.09
HOXA1-202ENST00000355633 EMILIN3Q9NT22 766 aa15.58■□□□□ 0.09
HOXA1-202ENST00000355633 C19orf81C9J6K1 198 aa15.58■□□□□ 0.08
HOXA1-202ENST00000355633 DGKZQ13574 1117 aa15.58■□□□□ 0.08
HOXA1-202ENST00000355633 CUL5Q93034 780 aa15.58■□□□□ 0.08
HOXA1-202ENST00000355633 RANBP17Q9H2T7 1088 aaKnown RBP15.58■□□□□ 0.08
HOXA1-202ENST00000355633 FBXO28Q9NVF7 368 aa15.58■□□□□ 0.08
HOXA1-202ENST00000355633 BIN2Q9UBW5 565 aaPredicted RBP15.58■□□□□ 0.08
HOXA1-202ENST00000355633 SNCAIPQ9Y6H5 919 aa15.58■□□□□ 0.08
HOXA1-202ENST00000355633 DCAF8L1A6NGE4 600 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 LIG1P18858 919 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 VCAM1P19320 739 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 MRPL12P52815 198 aaKnown RBP15.57■□□□□ 0.08
HOXA1-202ENST00000355633 TRAF1Q13077 416 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 NONOQ15233 471 aaKnown RBP eCLIP15.57■□□□□ 0.08
HOXA1-202ENST00000355633 USH1GQ495M9 461 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 SAMD1Q6SPF0 538 aaPredicted RBP15.57■□□□□ 0.08
HOXA1-202ENST00000355633 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 CCAR1Q8IX12 1150 aaKnown RBP15.57■□□□□ 0.08
HOXA1-202ENST00000355633 GLT8D2Q9H1C3 349 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 PSTPIP2Q9H939 334 aa15.57■□□□□ 0.08
HOXA1-202ENST00000355633 A0A1W2PQ27 194 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 A0A1W2PQ64 194 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 A0A1W2PQD8 194 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 WNT7AO00755 349 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 BMP15O95972 392 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 POTEIP0CG38 1075 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 POTEJP0CG39 1038 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 TTLL12Q14166 644 aaPredicted RBP15.56■□□□□ 0.08
HOXA1-202ENST00000355633 JAKMIP3Q5VZ66 844 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 TANGO6Q9C0B7 1094 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 RRAGCQ9HB90 399 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 AFG3L2Q9Y4W6 797 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 GSE1Q14687 1217 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 ZNF174Q15697 407 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 INF2Q27J81 1249 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 ZSCAN23Q3MJ62 389 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 AXDND1Q5T1B0 1012 aaPredicted RBP15.56■□□□□ 0.08
HOXA1-202ENST00000355633 ANKRD13AQ8IZ07 590 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 PRPF38AQ8NAV1 312 aaKnown RBP15.56■□□□□ 0.08
HOXA1-202ENST00000355633 C12orf42Q96LP6 360 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 SLF1Q9BQI6 1058 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 RPAP3Q9H6T3 665 aaPredicted RBP15.56■□□□□ 0.08
HOXA1-202ENST00000355633 TMEM260Q9NX78 707 aa15.56■□□□□ 0.08
HOXA1-202ENST00000355633 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.56■□□□□ 0.08
HOXA1-202ENST00000355633 HMGCS2P54868 508 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 MAP3K11Q16584 847 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 CCDC183Q5T5S1 534 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 CCDC174Q6PII3 467 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 CCDC73Q6ZRK6 1079 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 KRI1Q8N9T8 703 aaKnown RBP15.55■□□□□ 0.08
HOXA1-202ENST00000355633 MRPS27Q92552 414 aaKnown RBP15.55■□□□□ 0.08
HOXA1-202ENST00000355633 MORC2Q9Y6X9 1032 aaPredicted RBP15.55■□□□□ 0.08
HOXA1-202ENST00000355633 CUTAO60888 179 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 FLOT1O75955 427 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 CLK2P49760 499 aaKnown RBP15.55■□□□□ 0.08
HOXA1-202ENST00000355633 UBE2SQ16763 222 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 MAP1SQ66K74 1059 aaPredicted RBP15.55■□□□□ 0.08
HOXA1-202ENST00000355633 ARMC9Q7Z3E5 817 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 FSIP1Q8NA03 581 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 RBM46Q8TBY0 533 aaKnown RBP15.55■□□□□ 0.08
HOXA1-202ENST00000355633 DACT1Q9NYF0 836 aa15.55■□□□□ 0.08
HOXA1-202ENST00000355633 TMOD4Q9NZQ9 345 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms