RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 LONP1P36776 959 aaKnown RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 CTDSPL2Q05D32 466 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 CLIC6Q96NY7 704 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 PDCD2Q16342 344 aaPredicted RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 TEX11Q8IYF3 940 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 NYXQ9GZU5 481 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 NIP7Q9Y221 180 aaKnown RBP eCLIP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 ATP8A1Q9Y2Q0 1164 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 BACH1O14867 736 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 LRGUKQ96M69 825 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 NOVA2Q9UNW9 492 aaKnown RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 DHX9Q08211 1270 aaKnown RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 CUL1Q13616 776 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 GLE1Q53GS7 698 aaKnown RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 FBXO31Q5XUX0 539 aaPredicted RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 NXNQ6DKJ4 435 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 ARMC2Q8NEN0 867 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 PDZD8Q8NEN9 1154 aa13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 MAGOHBQ96A72 148 aaKnown RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 CNOT6LQ96LI5 555 aaKnown RBP13.9□□□□□ -0.18
SYNCRIP-201ENST00000355238 SCRN1Q12765 414 aa13.9□□□□□ -0.19
SYNCRIP-201ENST00000355238 KMT5BQ4FZB7 885 aa13.9□□□□□ -0.19
SYNCRIP-201ENST00000355238 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.19
SYNCRIP-201ENST00000355238 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 TTC4O95801 387 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 LMNB1P20700 586 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 GOLGA8FQ08AF8 430 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 GOLGA8DPQ0D2H9 430 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 REXO1Q8N1G1 1221 aaKnown RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 NFATC2IPQ8NCF5 419 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 IWS1Q96ST2 819 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 SETDB2Q96T68 719 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 CUEDC2Q9H467 287 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 PCDHB13Q9Y5F0 798 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 CD2APQ9Y5K6 639 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 CHMP2AO43633 222 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 VPS41P49754 854 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 SH3GL3Q99963 347 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 EIF2AQ9BY44 585 aaKnown RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 SLC24A3Q9HC58 644 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 ATP5HO75947 161 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 NEK9Q8TD19 979 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 DHTKD1Q96HY7 919 aaPredicted RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 KDM5DQ9BY66 1539 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 CD109Q6YHK3 1445 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 PDIA3P30101 505 aaKnown RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 PPM1FP49593 454 aaPredicted RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 TBC1D1Q86TI0 1168 aaPredicted RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 DZIP3Q86Y13 1208 aaKnown RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 NME8Q8N427 588 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 ANKRD13CQ8N6S4 541 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 C6orf118Q5T5N4 469 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 ACRBPQ8NEB7 543 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 SYMPKQ92797 1274 aaKnown RBP13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 FGFR1OP2Q9NVK5 253 aa13.89□□□□□ -0.19
SYNCRIP-201ENST00000355238 DEUP1Q05D60 604 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 RCN2Q14257 317 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 GALNT17Q6IS24 598 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 ADAT2Q7Z6V5 191 aaKnown RBP13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 TRMT2AQ8IZ69 625 aaKnown RBP13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 MAP4K1Q92918 833 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 APOEP02649 317 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 HADHQ16836 314 aaKnown RBP13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 BLIDQ8IZY5 108 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 EFHD1Q9BUP0 239 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 NDUFA10O95299 355 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 GYS2P54840 703 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 MAPK13O15264 365 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 ADCY2Q08462 1091 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 C10orf76Q5T2E6 689 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 SPDL1Q96EA4 605 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 INHBAP08476 426 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 YWHAEP62258 255 aaKnown RBP13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 NCAPGQ9BPX3 1015 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
SYNCRIP-201ENST00000355238 ZNF532Q9HCE3 1301 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 URB2Q14146 1524 aaKnown RBP13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 POC1B-GALNT4F8VUJ3 575 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 F8W031 263 aaPredicted RBP13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 ITGA6P23229 1130 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 PLTPP55058 493 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 ASPHQ12797 758 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 CCDC125Q86Z20 511 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 VTI1AQ96AJ9 217 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 KCNG1Q9UIX4 513 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 RASGRF2O14827 1237 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 DCTN3O75935 186 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 GARSP41250 739 aaKnown RBP13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 GPBP1Q86WP2 473 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 ABCC2Q92887 1545 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 HARSP12081 509 aaKnown RBP13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 RFC4P35249 363 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 MMEL1Q495T6 779 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 ARHGAP18Q8N392 663 aa13.87□□□□□ -0.19
SYNCRIP-201ENST00000355238 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms