RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SMCO2A6NFE2 343 aa25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 CDC25AP30304 524 aa25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 ANKRD31Q8N7Z5 1873 aa25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 DDX60LQ5H9U9 1706 aaKnown RBP25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 NAALADL2Q58DX5 795 aa25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 ZNF772Q68DY9 489 aaPredicted RBP25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 NLGN1Q8N2Q7 840 aa25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 KBTBD4Q9NVX7 518 aa25.1■■□□□ 1.61
NKX2-1-201ENST00000354822 LTBP1Q14766 1721 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 N4BP3O15049 544 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 CCDC175P0C221 793 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 KRT31Q15323 416 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 USP17L2Q6R6M4 530 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 TOGARAM2Q6ZUX3 1019 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 AKT1S1Q96B36 256 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 COA1Q9GZY4 146 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 OGFRQ9NZT2 677 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 NRXN2Q9P2S2 1712 aa25.09■■□□□ 1.61
NKX2-1-201ENST00000354822 ESYT2A0FGR8 921 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 STIM1Q13586 685 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 TRIM14Q14142 442 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 TCP11X2Q5H9J9 407 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 GTPBP4Q9BZE4 634 aaKnown RBP25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 PPEF1O14829 653 aaPredicted RBP25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 OR52Z1P0C646 297 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 CASQ1P31415 396 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 PRCPP42785 496 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 ELF2Q15723 593 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 ADSSL1Q8N142 457 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 RIOX1Q9H6W3 641 aa25.08■■□□□ 1.61
NKX2-1-201ENST00000354822 PLIN4Q96Q06 1357 aa25.08■■□□□ 1.6
NKX2-1-201ENST00000354822 MYH1P12882 1939 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 MFAP3LO75121 409 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 COPB1P53618 953 aaKnown RBP25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 NEK8Q86SG6 692 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 COL23A1Q86Y22 540 aaPredicted RBP25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 DAGLAQ9Y4D2 1042 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 KCNJ18B7U540 433 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 URI1O94763 535 aaPredicted RBP25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 GNG11P61952 73 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 KCNJ12Q14500 433 aa25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 SMAP1Q8IYB5 467 aaPredicted RBP25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 V9GYY5 206 aaPredicted RBP25.07■■□□□ 1.6
NKX2-1-201ENST00000354822 CCNT1O60563 726 aaKnown RBP25.06■■□□□ 1.6
NKX2-1-201ENST00000354822 RHOBTB3O94955 611 aa25.06■■□□□ 1.6
NKX2-1-201ENST00000354822 GTF2IP78347 998 aa25.06■■□□□ 1.6
NKX2-1-201ENST00000354822 CCDC47Q96A33 483 aaKnown RBP25.06■■□□□ 1.6
NKX2-1-201ENST00000354822 APBA3O96018 575 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 FECHP22830 423 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 ASPRV1Q53RT3 343 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 GDAQ9Y2T3 454 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 ATP6V0A2Q9Y487 856 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 PARP3Q9Y6F1 533 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 CASP14P31944 242 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 CBX1P83916 185 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 LETM2Q2VYF4 491 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 KMT5BQ4FZB7 885 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 CABP7Q86V35 215 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 MNS1Q8NEH6 495 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 FLAD1Q8NFF5 587 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 CPLX3Q8WVH0 158 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 MTMR4Q9NYA4 1195 aa25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 DDX41Q9UJV9 622 aaKnown RBP25.05■■□□□ 1.6
NKX2-1-201ENST00000354822 PP2D1A8MPX8 630 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 CCT6AP40227 531 aaKnown RBP25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 GABPAQ06546 454 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 TMTC1Q8IUR5 882 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 GIMAP8Q8ND71 665 aaPredicted RBP25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 NOC3LQ8WTT2 800 aaKnown RBP25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 PIGSQ96S52 555 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 PSMA7O14818 248 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 KLRC4O43908 158 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 GYPCP04921 128 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 PDHBP11177 359 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 PPP1R2P41236 205 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 ERCC6LQ2NKX8 1250 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 REXO1Q8N1G1 1221 aaKnown RBP25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 CPVLQ9H3G5 476 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 VAT1LQ9HCJ6 419 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 SWAP70Q9UH65 585 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 ADGRG1Q9Y653 693 aa25.04■■□□□ 1.6
NKX2-1-201ENST00000354822 SOWAHDA6NJG2 315 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 USP17L5A8MUK1 530 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 EEF1GP26641 437 aaKnown RBP25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 AMPD3Q01432 767 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 UBXN4Q92575 508 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 DHTKD1Q96HY7 919 aaPredicted RBP25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 VPS16Q9H269 839 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 THAP9Q9H5L6 903 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 EFCAB8A8MWE9 144 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 NPR1P16066 1061 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 MAP3K9P80192 1104 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 RASGRP2Q7LDG7 609 aa25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 ZC3H12CQ9C0D7 883 aaKnown RBP25.03■■□□□ 1.6
NKX2-1-201ENST00000354822 FOCADQ5VW36 1801 aa25.02■■□□□ 1.6
NKX2-1-201ENST00000354822 MYO3BQ8WXR4 1341 aa25.02■■□□□ 1.6
NKX2-1-201ENST00000354822 SRGNP10124 158 aa25.02■■□□□ 1.6
NKX2-1-201ENST00000354822 FBXO38Q6PIJ6 1188 aa25.02■■□□□ 1.6
NKX2-1-201ENST00000354822 TBCKQ8TEA7 893 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms