RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 SLC39A14Q15043 492 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 CABS1Q96KC9 395 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 CRAMP1Q96RY5 1269 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 MAGEC2Q9UBF1 373 aaPredicted RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 MYH13Q9UKX3 1938 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.471e-9■□□□□ 10.5
SND1-201ENST00000354725 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
SND1-201ENST00000354725 RBM12BQ8IXT5 1001 aaKnown RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 XPO4Q9C0E2 1151 aaKnown RBP12.13□□□□□ -0.47
SND1-201ENST00000354725 A0A1B0GVL5 298 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 PPFIA3O75145 1194 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 FGAP02671 866 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 ME1P48163 572 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 SLC7A5Q01650 507 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 CEBPZQ03701 1054 aaKnown RBP12.12□□□□□ -0.47
SND1-201ENST00000354725 TRIM65Q6PJ69 517 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 VGLL2Q8N8G2 317 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 FAM163AQ96GL9 167 aaPredicted RBP12.12□□□□□ -0.47
SND1-201ENST00000354725 PLEKHG4BQ96PX9 1271 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 PRR12Q9ULL5 1215 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 PHLPP2Q6ZVD8 1323 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 SPTLC2O15270 562 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 IFIT1P09914 478 aaKnown RBP12.12□□□□□ -0.47
SND1-201ENST00000354725 NPR1P16066 1061 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 CLNS1AP54105 237 aaKnown RBP12.12□□□□□ -0.47
SND1-201ENST00000354725 TOMM20Q15388 145 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 FKBP15Q5T1M5 1219 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 ZNF202O95125 648 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 MDM2Q00987 491 aaPredicted RBP12.12□□□□□ -0.47
SND1-201ENST00000354725 NTRK3Q16288 839 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 WLSQ5T9L3 541 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 FUT8Q9BYC5 575 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 PLEKHA4Q9H4M7 779 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 CD248Q9HCU0 757 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 MKS1Q9NXB0 559 aa12.12□□□□□ -0.47
SND1-201ENST00000354725 SKAP2O75563 359 aaPredicted RBP12.11□□□□□ -0.47
SND1-201ENST00000354725 PYGBP11216 843 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 PFKFB1P16118 471 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 PRELPP51888 382 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 TBX2Q13207 712 aaPredicted RBP12.11□□□□□ -0.47
SND1-201ENST00000354725 SCARF1Q14162 830 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 NT5DC1Q5TFE4 455 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 ANO1Q5XXA6 986 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 ARHGAP27Q6ZUM4 889 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 APPBP2Q92624 585 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 LZTS2Q9BRK4 669 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 PUS3Q9BZE2 481 aaKnown RBP12.11□□□□□ -0.47
SND1-201ENST00000354725 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 CCDC158Q5M9N0 1113 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 PUS7LQ9H0K6 701 aaKnown RBP12.11□□□□□ -0.47
SND1-201ENST00000354725 UBAP1Q9NZ09 502 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 AKAP2Q9Y2D5 859 aa12.11□□□□□ -0.47
SND1-201ENST00000354725 ZSCAN9O15535 394 aaPredicted RBP12.1□□□□□ -0.47
SND1-201ENST00000354725 RASA3Q14644 834 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 LONRF1Q17RB8 773 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 FCHSD1Q86WN1 690 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 C2CD5Q86YS7 1000 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 TBC1D5Q92609 795 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 STK36Q9NRP7 1315 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 PRC1O43663 620 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 CHST3Q7LGC8 479 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 CCDC85AQ96PX6 553 aaPredicted RBP12.1□□□□□ -0.47
SND1-201ENST00000354725 YIPF2Q9BWQ6 316 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 TCRBV5S4A2TA0A5A2 114 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 BECN2A8MW95 431 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 CDCA2Q69YH5 1023 aaPredicted RBP12.1□□□□□ -0.47
SND1-201ENST00000354725 ZNF594Q96JF6 807 aaPredicted RBP12.1□□□□□ -0.47
SND1-201ENST00000354725 C8orf76Q96K31 380 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 GREM2Q9H772 168 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 ARFGAP3Q9NP61 516 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 FAM217BQ9NTX9 383 aaPredicted RBP12.1□□□□□ -0.47
SND1-201ENST00000354725 INTS13Q9NVM9 706 aa12.1□□□□□ -0.47
SND1-201ENST00000354725 ZC3H4Q9UPT8 1303 aaKnown RBP12.1□□□□□ -0.47
SND1-201ENST00000354725 SH2B2O14492 632 aaPredicted RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 ADORA1P30542 326 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 ALDH1B1P30837 517 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 IFT88Q13099 833 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 IMMTQ16891 758 aaKnown RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 CCDC178Q5BJE1 867 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 MRRFQ96E11 262 aaKnown RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 XAGE2Q96GT9 111 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 MPHOSPH6Q99547 160 aaKnown RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 SUN2Q9UH99 717 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 FRMD3A2A2Y4 597 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 SGMS1Q86VZ5 419 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 SPDYE1Q8NFV5 336 aaPredicted RBP12.09□□□□□ -0.47
SND1-201ENST00000354725 SAAL1Q96ER3 474 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 IFNKQ9P0W0 207 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 LAMB1P07942 1786 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 BMP6P22004 513 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 PEX19P40855 299 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 GUCY1B3Q02153 619 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 GRAPQ13588 217 aa12.09□□□□□ -0.47
SND1-201ENST00000354725 MCM6Q14566 821 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms