RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ARMCX5Q6P1M9 558 aa23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 NEK8Q86SG6 692 aa23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 TRMT44Q8IYL2 757 aaKnown RBP23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 REXO1Q8N1G1 1221 aaKnown RBP23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 MTRQ99707 1265 aa23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 PI4KBQ9UBF8 816 aa23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 FAM198AQ9UFP1 575 aa23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 UQCRHLA0A096LP55 91 aa23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 UQCRHP07919 91 aa23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 ORC2Q13416 577 aaPredicted RBP23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 CUL4BQ13620 913 aa23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 GPATCH4Q5T3I0 446 aaKnown RBP23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 GPCPD1Q9NPB8 672 aa23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 DISC1Q9NRI5 854 aa23.05■■□□□ 1.28
CHRNA3-202ENST00000348639 DDTLA6NHG4 134 aaPredicted RBP23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 YDJCA8MPS7 323 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 SFPQP23246 707 aaKnown RBP eCLIP23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 CDC25AP30304 524 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 VSTM4Q8IW00 320 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 STAMQ92783 540 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 CCSER1Q9C0I3 900 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 CCNT1O60563 726 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 CD44P16070 742 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 STAT6P42226 847 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 KARSQ15046 597 aaKnown RBP23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 LETM2Q2VYF4 491 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 JMJD4Q9H9V9 463 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 KCND1Q9NSA2 647 aa23.04■■□□□ 1.28
CHRNA3-202ENST00000348639 PNMA6FA0A0J9YX94 578 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 PPP1R3GB7ZBB8 358 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 OR52Z1P0C646 297 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 CDK11BP21127 795 aaKnown RBP23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 SPATA1Q5VX52 437 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 PPP1R18Q6NYC8 613 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 ADGRF4Q8IZF3 695 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 TBCKQ8TEA7 893 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 AK8Q96MA6 479 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 BLZF1Q9H2G9 400 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 TDRD3Q9H7E2 651 aaKnown RBP23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 BIN2Q9UBW5 565 aaPredicted RBP23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 UBA7P41226 1012 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 ADCY7P51828 1080 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 MYRIPQ8NFW9 859 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 COA7Q96BR5 231 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 TRIM34Q9BYJ4 488 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 INTS13Q9NVM9 706 aa23.03■■□□□ 1.28
CHRNA3-202ENST00000348639 TPD52L1Q16890 204 aaPredicted RBP23.02■■□□□ 1.28
CHRNA3-202ENST00000348639 JAKMIP3Q5VZ66 844 aa23.02■■□□□ 1.28
CHRNA3-202ENST00000348639 RRAGBQ5VZM2 374 aa23.02■■□□□ 1.28
CHRNA3-202ENST00000348639 SH3BP5LQ7L8J4 393 aa23.02■■□□□ 1.28
CHRNA3-202ENST00000348639 SAMSN1Q9NSI8 373 aaKnown RBP23.02■■□□□ 1.28
CHRNA3-202ENST00000348639 SIPA1L1O43166 1804 aa23.02■■□□□ 1.28
CHRNA3-202ENST00000348639 CERKLQ49MI3 558 aaPredicted RBP23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 NAALADL2Q58DX5 795 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 HSP90AA4PQ58FG1 418 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 MKL1Q969V6 931 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 RMND1Q9NWS8 449 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 SYNRGQ9UMZ2 1314 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 PP2D1A8MPX8 630 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 TMEM232C9JQI7 657 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 NRDCO43847 1150 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 RAD21O60216 631 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 CCDC93Q567U6 631 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 TTBK2Q6IQ55 1244 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 TATDN1Q6P1N9 297 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 C16orf45Q96MC5 204 aaPredicted RBP23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 KANSL2Q9H9L4 492 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 NYAP2Q9P242 653 aa23.01■■□□□ 1.27
CHRNA3-202ENST00000348639 KCNJ6P48051 423 aa23■■□□□ 1.27
CHRNA3-202ENST00000348639 CCDC96Q2M329 555 aa23■■□□□ 1.27
CHRNA3-202ENST00000348639 SHROOM1Q2M3G4 852 aaPredicted RBP23■■□□□ 1.27
CHRNA3-202ENST00000348639 GRIPAP1Q4V328 841 aa23■■□□□ 1.27
CHRNA3-202ENST00000348639 KLHL10Q6JEL2 608 aa23■■□□□ 1.27
CHRNA3-202ENST00000348639 SMYD4Q8IYR2 804 aaPredicted RBP23■■□□□ 1.27
CHRNA3-202ENST00000348639 MTMR8Q96EF0 704 aa23■■□□□ 1.27
CHRNA3-202ENST00000348639 TMEM260Q9NX78 707 aa23■■□□□ 1.27
CHRNA3-202ENST00000348639 MYH4Q9Y623 1939 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 RPN1P04843 607 aaKnown RBP22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 MYL1P05976 194 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 DPEP1P16444 411 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 RTKN2Q8IZC4 609 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 RASSF8Q8NHQ8 419 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 PRMT6Q96LA8 375 aaPredicted RBP22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 RIC8AQ9NPQ8 531 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 ZBTB5O15062 677 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 ZNF658Q5TYW1 1059 aaPredicted RBP22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 CUEDC2Q9H467 287 aa22.99■■□□□ 1.27
CHRNA3-202ENST00000348639 PPP1R11O60927 126 aaPredicted RBP22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 ENTPD3O75355 529 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 RAD17O75943 681 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 EEF2P13639 858 aaKnown RBP22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 KCTD1Q719H9 257 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 CCAR2Q8N163 923 aaKnown RBP22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 LARGE2Q8N3Y3 721 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 ZNF277Q9NRM2 450 aaPredicted RBP22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 USP27XA6NNY8 438 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 DYNC1I1O14576 645 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 TNNT1P13805 278 aa22.98■■□□□ 1.27
CHRNA3-202ENST00000348639 SLC16A2P36021 539 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms