RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 IFFO2Q5TF58 517 aa31.22■■■□□ 2.59
SSBP4-202ENST00000348495 WDR33Q9C0J8 1336 aaKnown RBP31.22■■■□□ 2.59
SSBP4-202ENST00000348495 VPS37CA5D8V6 355 aaPredicted RBP31.21■■■□□ 2.59
SSBP4-202ENST00000348495 XBP1P17861 261 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 GUCY1B3Q02153 619 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 BRI3BPQ8WY22 251 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 SLC38A10Q9HBR0 1119 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 TRIM29Q14134 588 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 ATG4CQ96DT6 458 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 PHF20Q9BVI0 1012 aa31.21■■■□□ 2.59
SSBP4-202ENST00000348495 CCL15-CCL14A0A0B4J2E2 113 aa31.2■■■□□ 2.58
SSBP4-202ENST00000348495 VWA5AO00534 786 aa31.2■■■□□ 2.58
SSBP4-202ENST00000348495 ZSCAN22P10073 491 aaPredicted RBP31.2■■■□□ 2.58
SSBP4-202ENST00000348495 FDX1P10109 184 aa31.2■■■□□ 2.58
SSBP4-202ENST00000348495 CCL15Q16663 113 aa31.2■■■□□ 2.58
SSBP4-202ENST00000348495 HOXC10Q9NYD6 342 aa31.2■■■□□ 2.58
SSBP4-202ENST00000348495 KCNJ14Q9UNX9 436 aa31.2■■■□□ 2.58
SSBP4-202ENST00000348495 ZNF536O15090 1300 aa31.19■■■□□ 2.58
SSBP4-202ENST00000348495 TESPA1A2RU30 521 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-202ENST00000348495 SPDYE16A6NNV3 312 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-202ENST00000348495 FAM155AB1AL88 458 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-202ENST00000348495 MMP1P03956 469 aa31.19■■■□□ 2.58
SSBP4-202ENST00000348495 SAMD1Q6SPF0 538 aaPredicted RBP31.19■■■□□ 2.58
SSBP4-202ENST00000348495 AMNQ9BXJ7 453 aa31.19■■■□□ 2.58
SSBP4-202ENST00000348495 APLP1P51693 650 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 NPY5RQ15761 445 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 FBXO11Q86XK2 927 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 REPS2Q8NFH8 660 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 CCDC102AQ96A19 550 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 COA7Q96BR5 231 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 SLC45A1Q9Y2W3 748 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 PABPC4Q13310 644 aaKnown RBP eCLIP31.18■■■□□ 2.581e-6■■■■□ 22.3
SSBP4-202ENST00000348495 PPP1R18Q6NYC8 613 aa31.18■■■□□ 2.58
SSBP4-202ENST00000348495 ASCC2Q9H1I8 757 aaPredicted RBP31.18■■■□□ 2.58
SSBP4-202ENST00000348495 CCDC148Q8NFR7 591 aa31.17■■■□□ 2.58
SSBP4-202ENST00000348495 CREBZFQ9NS37 354 aa31.17■■■□□ 2.58
SSBP4-202ENST00000348495 PCDHA1Q9Y5I3 950 aa31.17■■■□□ 2.58
SSBP4-202ENST00000348495 A0A0G2JMZ2 1700 aa31.17■■■□□ 2.58
SSBP4-202ENST00000348495 ESYT2A0FGR8 921 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 BTBD19C9JJ37 291 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 ICAM1P05362 532 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 NAPAP54920 295 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 CCDC174Q6PII3 467 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 LBX2Q6XYB7 198 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 ANKRD23Q86SG2 305 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 CCDC12Q8WUD4 166 aaPredicted RBP31.16■■■□□ 2.58
SSBP4-202ENST00000348495 ZMYND12Q9H0C1 365 aa31.16■■■□□ 2.58
SSBP4-202ENST00000348495 ZBED4O75132 1171 aa31.15■■■□□ 2.58
SSBP4-202ENST00000348495 POTEEQ6S8J3 1075 aa31.15■■■□□ 2.58
SSBP4-202ENST00000348495 P2RX7Q99572 595 aaKnown RBP31.15■■■□□ 2.58
SSBP4-202ENST00000348495 F13A1P00488 732 aa31.15■■■□□ 2.58
SSBP4-202ENST00000348495 IRX3P78415 501 aaPredicted RBP31.15■■■□□ 2.58
SSBP4-202ENST00000348495 PTPN18Q99952 460 aa31.15■■■□□ 2.58
SSBP4-202ENST00000348495 MANSC4A6NHS7 340 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-202ENST00000348495 NLRP5P59047 1200 aa31.14■■■□□ 2.58
SSBP4-202ENST00000348495 KIF23Q02241 960 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-202ENST00000348495 TRAF1Q13077 416 aa31.14■■■□□ 2.58
SSBP4-202ENST00000348495 FOXD4L5Q5VV16 416 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-202ENST00000348495 FOXD4L4Q8WXT5 416 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-202ENST00000348495 COL11A1P12107 1806 aaPredicted RBP31.14■■■□□ 2.58
SSBP4-202ENST00000348495 ATP2A1O14983 1001 aa31.13■■■□□ 2.57
SSBP4-202ENST00000348495 OSBPP22059 807 aa31.13■■■□□ 2.57
SSBP4-202ENST00000348495 CALML3P27482 149 aa31.13■■■□□ 2.57
SSBP4-202ENST00000348495 OAZ1P54368 228 aa31.13■■■□□ 2.57
SSBP4-202ENST00000348495 GALNT17Q6IS24 598 aa31.13■■■□□ 2.57
SSBP4-202ENST00000348495 DAGLBQ8NCG7 672 aa31.13■■■□□ 2.57
SSBP4-202ENST00000348495 RASSF10A6NK89 507 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 HERVK_113P62684 666 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 RESTQ13127 1097 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 USH1GQ495M9 461 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 FERMT3Q86UX7 667 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 DIS3L2Q8IYB7 885 aaKnown RBP31.12■■■□□ 2.57
SSBP4-202ENST00000348495 AGBL1Q96MI9 1066 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 PNMA2Q9UL42 364 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 ZNF214Q9UL59 606 aaPredicted RBP31.12■■■□□ 2.57
SSBP4-202ENST00000348495 SMCHD1A6NHR9 2005 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 SMCO2A6NFE2 343 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 KIF28PB7ZC32 967 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 TAL1P17542 331 aaPredicted RBP31.12■■■□□ 2.57
SSBP4-202ENST00000348495 U2AF2P26368 475 aaKnown RBP eCLIP31.12■■■□□ 2.571e-7■□□□□ 8
SSBP4-202ENST00000348495 SAFBQ15424 915 aaKnown RBP eCLIP31.12■■■□□ 2.57
SSBP4-202ENST00000348495 FAM43AQ8N2R8 423 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 OXER1Q8TDS5 423 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 RAVER2Q9HCJ3 691 aaKnown RBP31.12■■■□□ 2.57
SSBP4-202ENST00000348495 PCDHA4Q9UN74 947 aa31.12■■■□□ 2.57
SSBP4-202ENST00000348495 BTBD18B2RXH4 712 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 PDHXO00330 501 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 ADAMTS3O15072 1205 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 TMEM132BQ14DG7 1078 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 MCTP1Q6DN14 999 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 MB21D1Q8N884 522 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 FOXP1Q9H334 677 aaPredicted RBP31.11■■■□□ 2.57
SSBP4-202ENST00000348495 PNMA3Q9UL41 463 aa31.11■■■□□ 2.57
SSBP4-202ENST00000348495 M0R2N6 131 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 KRT2P35908 639 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 ZSCAN16Q9H4T2 348 aaPredicted RBP31.1■■■□□ 2.57
SSBP4-202ENST00000348495 C6orf50Q9HD87 102 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 CCPG1Q9ULG6 757 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 ABCB11O95342 1321 aa31.1■■■□□ 2.57
SSBP4-202ENST00000348495 GNA11P29992 359 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms