RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 ZNF543Q08ER8 600 aa19.45■□□□□ 0.7
SMARCC2-202ENST00000347471 PLA2G4DQ86XP0 818 aa19.45■□□□□ 0.7
SMARCC2-202ENST00000347471 POLD1P28340 1107 aa19.45■□□□□ 0.7
SMARCC2-202ENST00000347471 ASPRV1Q53RT3 343 aa19.45■□□□□ 0.7
SMARCC2-202ENST00000347471 JMJD4Q9H9V9 463 aa19.45■□□□□ 0.7
SMARCC2-202ENST00000347471 A0A1B0GUL6 1792 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 TULP1O00294 542 aaPredicted RBP19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 NEK8Q86SG6 692 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 ZFP91Q96JP5 570 aaPredicted RBP19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 DHX36Q9H2U1 1008 aaKnown RBP19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 TDP2O95551 362 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 FMR1Q06787 632 aaKnown RBP eCLIP19.44■□□□□ 0.72e-6■■■□□ 15.8
SMARCC2-202ENST00000347471 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 DPF2Q92785 391 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 PCDHA1Q9Y5I3 950 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 CUL4BQ13620 913 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 KANK3Q6NY19 840 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 KRT25Q7Z3Z0 450 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 POTEDQ86YR6 584 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 CDK5RAP3Q96JB5 506 aa19.44■□□□□ 0.7
SMARCC2-202ENST00000347471 SLFN14P0C7P3 912 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 RTKN2Q8IZC4 609 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 C7orf43Q8WVR3 580 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 ARID3AQ99856 593 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 KANSL2Q9H9L4 492 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 SAMSN1Q9NSI8 373 aaKnown RBP19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 F5H6K3 240 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 ECE1P42892 770 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 KLRC3Q07444 240 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 TUBE1Q9UJT0 475 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 SERPINA10Q9UK55 444 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 RSBN1LQ6PCB5 846 aaPredicted RBP19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 FCHSD1Q86WN1 690 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 CPLX3Q8WVH0 158 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 CCDC17Q96LX7 622 aa19.43■□□□□ 0.7
SMARCC2-202ENST00000347471 ZNF579Q8NAF0 562 aaKnown RBP19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 PSTPIP2Q9H939 334 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 SKILP12757 684 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 TRAPPC10P48553 1259 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 FEZ1Q99689 392 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 SH3GLB2Q9NR46 395 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 CTNND2Q9UQB3 1225 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 NBPF9Q3BBW0 867 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 ZMYND12Q9H0C1 365 aa19.42■□□□□ 0.7
SMARCC2-202ENST00000347471 JAG1P78504 1218 aa19.41■□□□□ 0.7
SMARCC2-202ENST00000347471 QRICH1Q2TAL8 776 aa19.41■□□□□ 0.7
SMARCC2-202ENST00000347471 CCDC174Q6PII3 467 aa19.41■□□□□ 0.7
SMARCC2-202ENST00000347471 SLX4Q8IY92 1834 aa19.41■□□□□ 0.7
SMARCC2-202ENST00000347471 OR52Z1P0C646 297 aa19.41■□□□□ 0.7
SMARCC2-202ENST00000347471 MYO1BO43795 1136 aa19.41■□□□□ 0.7
SMARCC2-202ENST00000347471 POTEMA6NI47 508 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 IDEP14735 1019 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 ERCC3P19447 782 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 NCAPHQ15003 741 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 CDC37Q16543 378 aaPredicted RBP19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 DALRD3Q5D0E6 543 aaKnown RBP19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 ACER1Q8TDN7 264 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 KIFC2Q96AC6 838 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 DACH1Q9UI36 760 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 HOXA13P31271 388 aaPredicted RBP19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 CALCRLQ16602 461 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 PRAMEF18Q5VWM3 479 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 CABP7Q86V35 215 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 GDAQ9Y2T3 454 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 PNMA6FA0A0J9YX94 578 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 IGSF3O75054 1194 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 CXCL9Q07325 125 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 ZHX3Q9H4I2 956 aa19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 ZNF70Q9UC06 446 aaPredicted RBP19.4■□□□□ 0.7
SMARCC2-202ENST00000347471 ZNF500O60304 480 aaPredicted RBP19.39■□□□□ 0.7
SMARCC2-202ENST00000347471 NDUFB10O96000 172 aa19.39■□□□□ 0.7
SMARCC2-202ENST00000347471 SFPQP23246 707 aaKnown RBP eCLIP19.39■□□□□ 0.7
SMARCC2-202ENST00000347471 GPATCH4Q5T3I0 446 aaKnown RBP19.39■□□□□ 0.7
SMARCC2-202ENST00000347471 SPDYE2BA6NHP3 402 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 TPM3P06753 285 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 SPDYE6P0CI01 402 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 CCT6AP40227 531 aaKnown RBP19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 UBXN2AP68543 259 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 RAD51AP2Q09MP3 1159 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 TRMT1LQ7Z2T5 733 aaKnown RBP19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 TAOK3Q9H2K8 898 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 PPP1R11O60927 126 aaPredicted RBP19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 PRKG1Q13976 671 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 RRP1BQ14684 758 aaKnown RBP19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 TBC1D10BQ4KMP7 808 aaPredicted RBP19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 TMEM179Q6ZVK1 233 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 DYMQ7RTS9 669 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 CUL5Q93034 780 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 RIOX1Q9H6W3 641 aa19.39■□□□□ 0.69
SMARCC2-202ENST00000347471 ANKRD31Q8N7Z5 1873 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 ZBTB5O15062 677 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 OFD1O75665 1012 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 MRPL12P52815 198 aaKnown RBP19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 ASIC1P78348 528 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 MDM2Q00987 491 aaPredicted RBP19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 MRFAP1L1Q96HT8 127 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 SLC37A4O43826 429 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 PLCG1P19174 1290 aa19.38■□□□□ 0.69
SMARCC2-202ENST00000347471 MLKLQ8NB16 471 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms