RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MLKLQ8NB16 471 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 GRAPLQ8TC17 118 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 HINFPQ9BQA5 517 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 FBXO40Q9UH90 709 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 NUB1Q9Y5A7 615 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 SEC31AO94979 1220 aaKnown RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 KIAA0753Q2KHM9 967 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 SPECC1LQ69YQ0 1117 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 KRBA2Q6ZNG9 492 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 CNGA4Q8IV77 575 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 ZNF654Q8IZM8 581 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 PRPF31Q8WWY3 499 aaKnown RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 PSMB7Q99436 277 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 PRKAB2O43741 272 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 TUBB4AP04350 444 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 NCAPH2Q6IBW4 605 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 METTL23Q86XA0 190 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 CCDC113Q9H0I3 377 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 PPP2R2CQ9Y2T4 447 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 GYG1P46976 350 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 TFAP4Q01664 338 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 FBXO11Q86XK2 927 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 DNM3Q9UQ16 869 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 RABGAP1Q9Y3P9 1069 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 COL3A1P02461 1466 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 SNAP23O00161 211 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 CALUO43852 315 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
CLCN6-202ENST00000346436 MAATS1Q7Z4T9 603 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 NRKQ7Z2Y5 1582 aa12.05□□□□□ -0.48
CLCN6-202ENST00000346436 CHRNDQ07001 517 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 RNF187Q5TA31 235 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-202ENST00000346436 TSPYL2Q9H2G4 693 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-202ENST00000346436 TXNDC16Q9P2K2 825 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 SH3BP5O60239 455 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 IFFO1Q0D2I5 559 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 PPM1EQ8WY54 764 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 ANO3Q9BYT9 981 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 OATP04181 439 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 PPARAQ07869 468 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 NR5A1Q13285 461 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 SLFN13Q68D06 897 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 APOA5Q6Q788 366 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 PLEKHA4Q9H4M7 779 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 OAS2P29728 719 aaKnown RBP12.04□□□□□ -0.48
CLCN6-202ENST00000346436 KRT9P35527 623 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 STOX1Q6ZVD7 989 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 PROCA1Q8NCQ7 364 aaPredicted RBP12.04□□□□□ -0.48
CLCN6-202ENST00000346436 PPP1R14CQ8TAE6 165 aa12.04□□□□□ -0.48
CLCN6-202ENST00000346436 FOSP01100 380 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-202ENST00000346436 RNASE9P60153 205 aaKnown RBP12.03□□□□□ -0.48
CLCN6-202ENST00000346436 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
CLCN6-202ENST00000346436 KIF5AQ12840 1032 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 SLC39A14Q15043 492 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 FASTKD5Q7L8L6 764 aaKnown RBP12.03□□□□□ -0.48
CLCN6-202ENST00000346436 C10orf67Q8IYJ2 551 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 A0A0G2JLW4 131 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 KRT19P08727 400 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 SLC8A2Q9UPR5 921 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 CYP27B1O15528 508 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 KRT86O43790 486 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 GABPAQ06546 454 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 LIN9Q5TKA1 542 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 ZFYVE28Q9HCC9 887 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 ZBTB1Q9Y2K1 713 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 FAM169AQ9Y6X4 670 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 PCP11498 1178 aaKnown RBP12.03□□□□□ -0.48
CLCN6-202ENST00000346436 PAK1Q13153 545 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 NAPGQ99747 312 aaPredicted RBP12.03□□□□□ -0.48
CLCN6-202ENST00000346436 MED10Q9BTT4 135 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 ODF2LQ9ULJ1 636 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 CD163L1Q9NR16 1453 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 A0A1W2PQ27 194 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 A0A1W2PQ64 194 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 A0A1W2PQD8 194 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 PPP2R5AQ15172 486 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 ELMOD1Q8N336 334 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 NELFBQ8WX92 580 aa12.03□□□□□ -0.48
CLCN6-202ENST00000346436 KRT10P13645 584 aa12.02□□□□□ -0.48
CLCN6-202ENST00000346436 TBC1D8BQ0IIM8 1120 aa12.02□□□□□ -0.48
CLCN6-202ENST00000346436 FANCBQ8NB91 859 aa12.02□□□□□ -0.48
CLCN6-202ENST00000346436 NACC1Q96RE7 527 aa12.02□□□□□ -0.48
CLCN6-202ENST00000346436 MIS12Q9H081 205 aa12.02□□□□□ -0.48
CLCN6-202ENST00000346436 TNNC2P02585 160 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 KRT5P13647 590 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 CDC25BP30305 580 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 POLR3EQ9NVU0 708 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 TNKSO95271 1327 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 USP17L21D6R901 530 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 CSRNP2Q9H175 543 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 NARFQ9UHQ1 456 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 RASAL2Q9UJF2 1139 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 MAP2P11137 1827 aaKnown RBP12.02□□□□□ -0.49
CLCN6-202ENST00000346436 KBTBD13C9JR72 458 aa12.02□□□□□ -0.49
CLCN6-202ENST00000346436 XPAP23025 273 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms