RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
SPAST-202ENST00000345662 KIF21AQ7Z4S6 1674 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 HSP90AA5PQ58FG0 334 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 FAM133BQ5BKY9 247 aaKnown RBP19.16■□□□□ 0.66
SPAST-202ENST00000345662 RIC8AQ9NPQ8 531 aa19.16■□□□□ 0.66
SPAST-202ENST00000345662 PDE8AO60658 829 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 CCDC89Q8N998 374 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 CCHCR1Q8TD31 782 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 KIFC2Q96AC6 838 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 KDM3AQ9Y4C1 1321 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 USP27XA6NNY8 438 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 SAP30BPQ9UHR5 308 aaKnown RBP19.15■□□□□ 0.66
SPAST-202ENST00000345662 SLFN14P0C7P3 912 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 NAA35Q5VZE5 725 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 ZNF589Q86UQ0 364 aaPredicted RBP19.15■□□□□ 0.66
SPAST-202ENST00000345662 MAGEF1Q9HAY2 307 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 SCOCQ9UIL1 159 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 SYNMO15061 1565 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 MED23Q9ULK4 1368 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 COBLO75128 1261 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 PALM2Q8IXS6 379 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 TEX11Q8IYF3 940 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 SMYD4Q8IYR2 804 aaPredicted RBP19.15■□□□□ 0.66
SPAST-202ENST00000345662 IFNL3Q8IZI9 196 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 AFAP1L2Q8N4X5 818 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 EPSTI1Q96J88 318 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 SLC39A2Q9NP94 309 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 FAF1Q9UNN5 650 aaPredicted RBP19.15■□□□□ 0.66
SPAST-202ENST00000345662 ZDHHC9Q9Y397 364 aa19.15■□□□□ 0.66
SPAST-202ENST00000345662 BZW2Q9Y6E2 419 aaKnown RBP19.15■□□□□ 0.66
SPAST-202ENST00000345662 TTC16Q8NEE8 873 aa19.14■□□□□ 0.66
SPAST-202ENST00000345662 DHTKD1Q96HY7 919 aaPredicted RBP19.14■□□□□ 0.66
SPAST-202ENST00000345662 ATP8A1Q9Y2Q0 1164 aa19.14■□□□□ 0.66
SPAST-202ENST00000345662 DAAM1Q9Y4D1 1078 aa19.14■□□□□ 0.66
SPAST-202ENST00000345662 TRIM37O94972 964 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 CXCR5P32302 372 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 RNASELQ05823 741 aaKnown RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 BBOF1Q8ND07 529 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 ATP2A3Q93084 1043 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 JAG2Q9Y219 1238 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 PGRMC1O00264 195 aaKnown RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 CYP2C19P33261 490 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 VPS41P49754 854 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 SLMAPQ14BN4 828 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.14■□□□□ 0.65
SPAST-202ENST00000345662 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 MFAP3LO75121 409 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 PDCLQ13371 301 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 GEN1Q17RS7 908 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 ZSCAN10Q96SZ4 725 aaPredicted RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 NYXQ9GZU5 481 aa19.14■□□□□ 0.65
SPAST-202ENST00000345662 NOP53Q9NZM5 478 aaKnown RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 NOVA2Q9UNW9 492 aaKnown RBP19.14■□□□□ 0.65
SPAST-202ENST00000345662 OR52Z1P0C646 297 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 RFC4P35249 363 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 ZBED6P86452 979 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 DHX9Q08211 1270 aaKnown RBP19.13■□□□□ 0.65
SPAST-202ENST00000345662 CTAGE3PQ8IX95 158 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 ANKRD7Q92527 254 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 CD2APQ9Y5K6 639 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 TECP42680 631 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 NECTIN1Q15223 517 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 NBPF9Q3BBW0 867 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 ZNF354CQ86Y25 554 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 EEF2KMTQ96G04 330 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 SMCO2A6NFE2 343 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 RASA3Q14644 834 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 TOGARAM2Q6ZUX3 1019 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 TXLNGQ9NUQ3 528 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 RWDD2AQ9UIY3 292 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 SCG2P13521 617 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 ATF2P15336 505 aa19.13■□□□□ 0.65
SPAST-202ENST00000345662 ZSCAN20P17040 1043 aaPredicted RBP19.13■□□□□ 0.65
SPAST-202ENST00000345662 ZNF658Q5TYW1 1059 aaPredicted RBP19.13■□□□□ 0.65
SPAST-202ENST00000345662 TRIM6Q9C030 488 aaPredicted RBP19.13■□□□□ 0.65
SPAST-202ENST00000345662 NHEJ1Q9H9Q4 299 aaPredicted RBP19.13■□□□□ 0.65
SPAST-202ENST00000345662 ZMYM1Q5SVZ6 1142 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 GRAMD1CQ8IYS0 662 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 MPHOSPH6Q99547 160 aaKnown RBP19.12■□□□□ 0.65
SPAST-202ENST00000345662 TNKSO95271 1327 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 SH3TC1Q8TE82 1336 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 MOCS3O95396 460 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 IFNB1P01574 187 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 APOA5Q6Q788 366 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 GPBP1Q86WP2 473 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 AATFQ9NY61 560 aaKnown RBP eCLIP19.12■□□□□ 0.65
SPAST-202ENST00000345662 SKIP12755 728 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 BPIFA3Q9BQP9 254 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 SPZ1Q9BXG8 430 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 CUEDC2Q9H467 287 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 SLC52A2Q9HAB3 445 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 TACC3Q9Y6A5 838 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 SLC7A5Q01650 507 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 DIXDC1Q155Q3 683 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 SRLQ86TD4 932 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 FBXO41Q8TF61 875 aa19.12■□□□□ 0.65
SPAST-202ENST00000345662 IL2RBP14784 551 aa19.11■□□□□ 0.65
SPAST-202ENST00000345662 EIF3BP55884 814 aaKnown RBP19.11■□□□□ 0.65
SPAST-202ENST00000345662 TFAP4Q01664 338 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms