RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 KIAA1683Q9H0B3 1180 aa15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 BTBD7Q9P203 1132 aa15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 SAP30BPQ9UHR5 308 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 MYH4Q9Y623 1939 aa15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 LAMA2P24043 3122 aaKnown RBP15.69■□□□□ 0.1
HERPUD1-202ENST00000344114 CYBAP13498 195 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 VCAM1P19320 739 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 NT5C2P49902 561 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 ATN1P54259 1190 aaPredicted RBP15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 USP14P54578 494 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 RTP1P59025 263 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 SART3Q15020 963 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 ZYXQ15942 572 aaKnown RBP15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 SBK1Q52WX2 424 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 TRPV1Q8NER1 839 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 EHD4Q9H223 541 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 ATP6V1DQ9Y5K8 247 aa15.68■□□□□ 0.1
HERPUD1-202ENST00000344114 NID2Q14112 1375 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 KLF18A0A0U1RQI7 1052 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 GOLGA8BA8MQT2 603 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 DHX16O60231 1041 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 F13A1P00488 732 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 CYP2C19P33261 490 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 LIFRP42702 1097 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 ATP2B2Q01814 1243 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 MCTP1Q6DN14 999 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 SGMS1Q86VZ5 419 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 FEZ1Q99689 392 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 DCP1AQ9NPI6 582 aaPredicted RBP15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 PRKAG2Q9UGJ0 569 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 SPTBN5Q9NRC6 3674 aaKnown RBP15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 ROBO3Q96MS0 1386 aa15.67■□□□□ 0.1
HERPUD1-202ENST00000344114 SPDYE16A6NNV3 312 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 MINDY4BA8MYZ0 360 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 KDM4AO75164 1064 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 SLC3A2P08195 630 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 CNGA1P29973 690 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 SNX17Q15036 470 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 WDR78Q5VTH9 848 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 LARP1BQ659C4 914 aaKnown RBP15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 CTR9Q6PD62 1173 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 ESR2Q92731 530 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 CDX2Q99626 313 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 NAP1L2Q9ULW6 460 aaPredicted RBP15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 MTMR6Q9Y217 621 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 IVNS1ABPQ9Y6Y0 642 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 EYSQ5T1H1 3165 aa15.66■□□□□ 0.1
HERPUD1-202ENST00000344114 TRAK2O60296 914 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 FGRP09769 529 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 SHHQ15465 462 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 TMEM67Q5HYA8 995 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 FOXD4L5Q5VV16 416 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 OLFML2BQ68BL8 750 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 SLC39A5Q6ZMH5 540 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 ACER1Q8TDN7 264 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 IGDCC4Q8TDY8 1250 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 FOXD4L4Q8WXT5 416 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 LY9Q9HBG7 655 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 TOMM22Q9NS69 142 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 SERPINB13Q9UIV8 391 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 BRPF3Q9ULD4 1205 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 GREB1LQ9C091 1923 aaPredicted RBP15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 VCANP13611 3396 aa15.65■□□□□ 0.1
HERPUD1-202ENST00000344114 PARP14Q460N5 1801 aa15.64■□□□□ 0.1
HERPUD1-202ENST00000344114 ERICH2A1L162 156 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 PTPDC1A2A3K4 754 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 VPS37CA5D8V6 355 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 ORC4O43929 436 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 JAK2O60674 1132 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 USP5P45974 858 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 RCAN1P53805 252 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 CCT2P78371 535 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 RRP12Q5JTH9 1297 aaKnown RBP15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 C9orf50Q5SZB4 431 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 GJC2Q5T442 439 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 APOA5Q6Q788 366 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 AMOTL1Q8IY63 956 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 FAM184AQ8NB25 1140 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 ARRDC4Q8NCT1 418 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 SEMA6BQ9H3T3 888 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 RPAP3Q9H6T3 665 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 GPHNQ9NQX3 736 aaPredicted RBP15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 ZSWIM5Q9P217 1185 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 ATP11BQ9Y2G3 1177 aa15.64■□□□□ 0.09
HERPUD1-202ENST00000344114 USP17L12C9JPN9 530 aa15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 USP17L21D6R901 530 aa15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 IFIT3O14879 490 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 CTDNEP1O95476 244 aa15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 GUCY1A2P33402 732 aa15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 SMAD3P84022 425 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 ABCB5Q2M3G0 1257 aa15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 CERKLQ49MI3 558 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 TMTC2Q8N394 836 aa15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 MAFAQ8NHW3 353 aaPredicted RBP15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 ZNFX1Q9P2E3 1918 aaKnown RBP15.63■□□□□ 0.09
HERPUD1-202ENST00000344114 CCDC69A6NI79 296 aa15.62■□□□□ 0.09
HERPUD1-202ENST00000344114 KBTBD13C9JR72 458 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms