RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 TBCKQ8TEA7 893 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 PRPF3O43395 683 aaKnown RBP9.58□□□□□ -0.88
FGD6-201ENST00000343958 CERKLQ49MI3 558 aaPredicted RBP9.58□□□□□ -0.88
FGD6-201ENST00000343958 USP17L2Q6R6M4 530 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 SMIM5Q71RC9 77 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 ANKRD42Q8N9B4 389 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 IFT74Q96LB3 600 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 TMOD4Q9NZQ9 345 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 TRPM1Q7Z4N2 1603 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 GDF11O95390 407 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 MOCS3O95396 460 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 IFNAR1P17181 557 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 MECOMQ03112 1051 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 C2orf54Q08AI8 447 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 ZNF365Q70YC5 407 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 PLA2G4DQ86XP0 818 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 TUBGCP2Q9BSJ2 902 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 CPVLQ9H3G5 476 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 ZNF658Q5TYW1 1059 aaPredicted RBP9.58□□□□□ -0.88
FGD6-201ENST00000343958 P2RX5Q93086 422 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 PDE11AQ9HCR9 933 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 FOXN1O15353 648 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 SLFN14P0C7P3 912 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 C6orf163Q5TEZ5 329 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 GLT8D2Q9H1C3 349 aa9.58□□□□□ -0.88
FGD6-201ENST00000343958 CLRN2A0PK11 232 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 GAS7O60861 476 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 SCARF1Q14162 830 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 STOX1Q6ZVD7 989 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 MB21D2Q8IYB1 491 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 CCDC105Q8IYK2 499 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 LRRC45Q96CN5 670 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 HAUS4Q9H6D7 363 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 LIN9Q5TKA1 542 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 SRGAP1Q7Z6B7 1085 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 GSDMAQ96QA5 445 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 SRPRBQ9Y5M8 271 aaKnown RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 FOXO4P98177 505 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 ANKS4BQ8N8V4 417 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 MGARPQ8TDB4 240 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 KDM3AQ9Y4C1 1321 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 E7EVH7 732 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 STAMBPO95630 424 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 PABPC4Q13310 644 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■■■■ 41.4
FGD6-201ENST00000343958 NAA30Q147X3 362 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 CCDC84Q86UT8 332 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 UBL4BQ8N7F7 174 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 ENOX1Q8TC92 643 aaKnown RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 PPANQ9NQ55 473 aaKnown RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 CDC23Q9UJX2 597 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 KIAA1024Q9UPX6 916 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 ERCC5P28715 1186 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 ATP1A2P50993 1020 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 ICA1Q05084 483 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 CUL4BQ13620 913 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 KMT5BQ4FZB7 885 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 TAB3Q8N5C8 712 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 VTI1AQ96AJ9 217 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 FERMT1Q9BQL6 677 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 POLD1P28340 1107 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 PICK1Q9NRD5 415 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 TESPA1A2RU30 521 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 K7ENM7 598 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 KRT19P08727 400 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 IRX5P78411 483 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 TRPC3Q13507 836 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 CEP85LQ5SZL2 805 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 FAM196AQ6ZSG2 479 aa9.57□□□□□ -0.88
FGD6-201ENST00000343958 RPAP1Q9BWH6 1393 aaPredicted RBP9.57□□□□□ -0.88
FGD6-201ENST00000343958 CLIC2O15247 247 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 FLOT1O75955 427 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 POLR2MP0CAP2 368 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 NKIRAS1Q9NYS0 192 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 TSKSQ9UJT2 592 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 AMFRQ9UKV5 643 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 NMT2O60551 498 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 SPICE1Q8N0Z3 855 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 TRIM58Q8NG06 486 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 MAK16Q9BXY0 300 aaKnown RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 SPTLC3Q9NUV7 552 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 CEP83Q9Y592 693 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 TAF6LQ9Y6J9 622 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 CRB1P82279 1406 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 PPEF1O14829 653 aaPredicted RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 INPP5BP32019 993 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 CERS3Q8IU89 383 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 DBNDD1Q9H9R9 158 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 SERPINB2P05120 415 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 GJA10Q969M2 543 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 NAP1L3Q99457 506 aaPredicted RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 DDX41Q9UJV9 622 aaKnown RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 GDAQ9Y2T3 454 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.56□□□□□ -0.88
FGD6-201ENST00000343958 MRPS25P82663 173 aaKnown RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 KRT12Q99456 494 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 ACTN4O43707 911 aaKnown RBP9.56□□□□□ -0.88
FGD6-201ENST00000343958 GNA14O95837 355 aa9.56□□□□□ -0.88
FGD6-201ENST00000343958 STK24Q9Y6E0 443 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms