RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 STAT2P52630 851 aa21.81■■□□□ 1.08
CDHR4-201ENST00000343366 Q7L0L9 218 aa21.81■■□□□ 1.08
CDHR4-201ENST00000343366 C7orf61Q8IZ16 206 aa21.81■■□□□ 1.08
CDHR4-201ENST00000343366 ZNF654Q8IZM8 581 aa21.81■■□□□ 1.08
CDHR4-201ENST00000343366 COA7Q96BR5 231 aa21.81■■□□□ 1.08
CDHR4-201ENST00000343366 PARP1P09874 1014 aaKnown RBP21.8■■□□□ 1.08
CDHR4-201ENST00000343366 GNAQP50148 359 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 NEK4P51957 841 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 FAM83BQ5T0W9 1011 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 LBX2Q6XYB7 198 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 MB21D1Q8N884 522 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 PRPF38AQ8NAV1 312 aaKnown RBP21.8■■□□□ 1.08
CDHR4-201ENST00000343366 UPF3BQ9BZI7 483 aaKnown RBP21.8■■□□□ 1.08
CDHR4-201ENST00000343366 ASCC2Q9H1I8 757 aaPredicted RBP21.8■■□□□ 1.08
CDHR4-201ENST00000343366 OGDHLQ9ULD0 1010 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 ZMYND8Q9ULU4 1186 aaPredicted RBP21.8■■□□□ 1.08
CDHR4-201ENST00000343366 RPTORQ8N122 1335 aa21.8■■□□□ 1.08
CDHR4-201ENST00000343366 FRMPD3Q5JV73 1810 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 CCDC196A0A1B0GTZ2 297 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 FLOT1O75955 427 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 MAGEA10P43363 369 aaPredicted RBP21.79■■□□□ 1.08
CDHR4-201ENST00000343366 EVCP57679 992 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 ZNF543Q08ER8 600 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 TROAPQ12815 778 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 TRIM32Q13049 653 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 CCDC96Q2M329 555 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 KIAA1755Q5JYT7 1200 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 MAP3K21Q5TCX8 1036 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
CDHR4-201ENST00000343366 LZTS2Q9BRK4 669 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 LRRC2Q9BYS8 371 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 PNMA2Q9UL42 364 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 PFASO15067 1338 aa21.79■■□□□ 1.08
CDHR4-201ENST00000343366 ST18O60284 1047 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 APOA5Q6Q788 366 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 BTNL9Q6UXG8 535 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 TDHQ8IZJ6 230 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 BRF1Q92994 677 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 CHMP4CQ96CF2 233 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 SLF1Q9BQI6 1058 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 RBM28Q9NW13 759 aaKnown RBP21.78■■□□□ 1.08
CDHR4-201ENST00000343366 PARP14Q460N5 1801 aa21.78■■□□□ 1.08
CDHR4-201ENST00000343366 TMEM232C9JQI7 657 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 ZBTB43O43298 467 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 CPA1P15085 419 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 SMARCA1P28370 1054 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 DSG3P32926 999 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 IKQ13123 557 aaPredicted RBP21.77■■□□□ 1.08
CDHR4-201ENST00000343366 GRM4Q14833 912 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 ZNF274Q96GC6 653 aaPredicted RBP21.77■■□□□ 1.08
CDHR4-201ENST00000343366 TCEANC2Q96MN5 208 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 KIF2CQ99661 725 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 PPP1R9AQ9ULJ8 1098 aa21.77■■□□□ 1.08
CDHR4-201ENST00000343366 ISY1Q9ULR0 285 aaKnown RBP21.77■■□□□ 1.08
CDHR4-201ENST00000343366 KLF18A0A0U1RQI7 1052 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 COL6A1P12109 1028 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 HERVK_113P62684 666 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 NUP133Q8WUM0 1156 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 TRIB2Q92519 343 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 CDH23Q9H251 3354 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 C11orf49Q9H6J7 331 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 MTMR7Q9Y216 660 aa21.76■■□□□ 1.07
CDHR4-201ENST00000343366 CTDP1Q9Y5B0 961 aaPredicted RBP21.76■■□□□ 1.07
CDHR4-201ENST00000343366 PALM3A6NDB9 673 aaPredicted RBP21.75■■□□□ 1.07
CDHR4-201ENST00000343366 MCM2P49736 904 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 COL9A3Q14050 684 aaPredicted RBP21.75■■□□□ 1.07
CDHR4-201ENST00000343366 TOB2Q14106 344 aaPredicted RBP21.75■■□□□ 1.07
CDHR4-201ENST00000343366 KCTD1Q719H9 257 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 FANCBQ8NB91 859 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 P2RX7Q99572 595 aaKnown RBP21.75■■□□□ 1.07
CDHR4-201ENST00000343366 SENP2Q9HC62 589 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 HMX1Q9NP08 348 aaPredicted RBP21.75■■□□□ 1.07
CDHR4-201ENST00000343366 MORF4L1Q9UBU8 362 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 ADAMTS5Q9UNA0 930 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 RABGAP1Q9Y3P9 1069 aa21.75■■□□□ 1.07
CDHR4-201ENST00000343366 RLFQ13129 1914 aa21.74■■□□□ 1.07
CDHR4-201ENST00000343366 NID2Q14112 1375 aa21.74■■□□□ 1.07
CDHR4-201ENST00000343366 ZBED4O75132 1171 aa21.74■■□□□ 1.07
CDHR4-201ENST00000343366 SYN1P17600 705 aa21.74■■□□□ 1.07
CDHR4-201ENST00000343366 NUP88Q99567 741 aaPredicted RBP21.74■■□□□ 1.07
CDHR4-201ENST00000343366 COL25A1Q9BXS0 654 aaPredicted RBP21.74■■□□□ 1.07
CDHR4-201ENST00000343366 GPHNQ9NQX3 736 aaPredicted RBP21.74■■□□□ 1.07
CDHR4-201ENST00000343366 MAD2L2Q9UI95 211 aa21.74■■□□□ 1.07
CDHR4-201ENST00000343366 SPDYE16A6NNV3 312 aaPredicted RBP21.73■■□□□ 1.07
CDHR4-201ENST00000343366 KLRF2D3W0D1 207 aa21.73■■□□□ 1.07
CDHR4-201ENST00000343366 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
CDHR4-201ENST00000343366 OAZ1P54368 228 aa21.73■■□□□ 1.07
CDHR4-201ENST00000343366 APOBRQ0VD83 1088 aa21.73■■□□□ 1.07
CDHR4-201ENST00000343366 TRAF1Q13077 416 aa21.73■■□□□ 1.07
CDHR4-201ENST00000343366 SYDE2Q5VT97 1194 aa21.73■■□□□ 1.07
CDHR4-201ENST00000343366 MICU3Q86XE3 530 aa21.73■■□□□ 1.07
CDHR4-201ENST00000343366 GOLGA8AA7E2F4 631 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 GOLGA8BA8MQT2 603 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 VWA5AO00534 786 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 ATP2A1O14983 1001 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 DHX16O60231 1041 aaKnown RBP21.72■■□□□ 1.07
CDHR4-201ENST00000343366 COPB2P35606 906 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 AK2P54819 239 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 CCNA1P78396 465 aa21.72■■□□□ 1.07
CDHR4-201ENST00000343366 RTN1Q16799 776 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms