RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PCDHA1Q9Y5I3 950 aa7.97□□□□□ -1.13
VCAN-202ENST00000342785 CCNE1P24864 410 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 SCNN1DP51172 638 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 MECOMQ03112 1051 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 CNKSR2Q8WXI2 1034 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 KCNB2Q92953 911 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 SELENOSQ9BQE4 189 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 MRPL44Q9H9J2 332 aaKnown RBP7.96□□□□□ -1.13
VCAN-202ENST00000342785 MAGEF1Q9HAY2 307 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 PDE11AQ9HCR9 933 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 BSDC1Q9NW68 430 aaPredicted RBP7.96□□□□□ -1.13
VCAN-202ENST00000342785 GDAQ9Y2T3 454 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 STK36Q9NRP7 1315 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 LAD1O00515 517 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 BACH1O14867 736 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 FOXN1O15353 648 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 ATP8B1O43520 1251 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 GCNT3O95395 438 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 PRR16Q569H4 304 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 PEX26Q7Z412 305 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 ZNF579Q8NAF0 562 aaKnown RBP7.96□□□□□ -1.13
VCAN-202ENST00000342785 LARP4BQ92615 738 aaKnown RBP7.96□□□□□ -1.13
VCAN-202ENST00000342785 AK8Q96MA6 479 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 PARD6BQ9BYG5 372 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 SH2D4AQ9H788 454 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 CTTNBP2NLQ9P2B4 639 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 UTYO14607 1347 aa7.96□□□□□ -1.13
VCAN-202ENST00000342785 XRCC5P13010 732 aaKnown RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 CYP27A1Q02318 531 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 KRT31Q15323 416 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 ARL6IP4Q66PJ3 421 aaKnown RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 CCDC121Q6ZUS5 278 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 MAEAQ7L5Y9 396 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 ENAHQ8N8S7 591 aaPredicted RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 TBCKQ8TEA7 893 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 LSM14BQ9BX40 385 aaKnown RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 ARHGEF10LQ9HCE6 1279 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 DIP2CQ9Y2E4 1556 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 PALLDQ8WX93 1383 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 XDHP47989 1333 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 POLR2FP61218 127 aaKnown RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 KIAA0825Q8IV33 1275 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 CPXCR1Q8N123 301 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 IPO4Q8TEX9 1081 aaKnown RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 RWDD2AQ9UIY3 292 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 IQGAP1P46940 1657 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 COL3A1P02461 1466 aaPredicted RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 TECPR2O15040 1411 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 USP17L3A6NCW0 530 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 USP17L4A6NCW7 530 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 ADAM9Q13443 819 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 USP17L2Q6R6M4 530 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 CLEC4GQ6UXB4 293 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 USP17L1Q7RTZ2 530 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 PANX2Q96RD6 677 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 PIGSQ96S52 555 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 NAP1L3Q99457 506 aaPredicted RBP7.96□□□□□ -1.14
VCAN-202ENST00000342785 BPIFA3Q9BQP9 254 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 CDC42BPGQ6DT37 1551 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 BUB1O43683 1085 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 RDH13Q8NBN7 331 aa7.96□□□□□ -1.14
VCAN-202ENST00000342785 A0A0G2JLW4 131 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 GNA14O95837 355 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CYP2D6P10635 497 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 ANTXR2P58335 489 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 PPARDQ03181 441 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 LRRC41Q15345 812 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CCDC91Q7Z6B0 441 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 TPH2Q8IWU9 490 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 PAF1Q8N7H5 531 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 RETREG2Q8NC44 543 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 ZNF335Q9H4Z2 1342 aaPredicted RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 A0A1W2PRG0 241 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CCDC169A6NNP5 214 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 DHX40Q8IX18 779 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 SRP68Q9UHB9 627 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 CEP152O94986 1710 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 KDM3AQ9Y4C1 1321 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CD163L1Q9NR16 1453 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 ACTN4O43707 911 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 MFAP3LO75121 409 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CTDNEP1O95476 244 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 STAT1P42224 750 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 RCAN1P53805 252 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 ZBED6P86452 979 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CYP4A11Q02928 519 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 BIRC3Q13489 604 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 PPP1R7Q15435 360 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 FAM182BQ5T319 152 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 SLFN13Q68D06 897 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 DAAM2Q86T65 1068 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 KIAA1024Q9UPX6 916 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 REREQ9P2R6 1566 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 ABCC12Q96J65 1359 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 NDUFA10O95299 355 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 H2AFZP0C0S5 128 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 FKBP3Q00688 224 aaKnown RBP7.95□□□□□ -1.14
VCAN-202ENST00000342785 H2AFVQ71UI9 128 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 CCDC50Q8IVM0 306 aa7.95□□□□□ -1.14
VCAN-202ENST00000342785 JDP2Q8WYK2 163 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms