RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 TMTC1Q8IUR5 882 aa8.19□□□□□ -1.1
PTPRR-202ENST00000342084 ADSSL1Q8N142 457 aa8.19□□□□□ -1.1
PTPRR-202ENST00000342084 TGFBRAP1Q8WUH2 860 aa8.19□□□□□ -1.1
PTPRR-202ENST00000342084 TRIM47Q96LD4 638 aa8.19□□□□□ -1.1
PTPRR-202ENST00000342084 NAPGQ99747 312 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-202ENST00000342084 MKNK2Q9HBH9 465 aa8.19□□□□□ -1.1
PTPRR-202ENST00000342084 STX8Q9UNK0 236 aa8.19□□□□□ -1.1
PTPRR-202ENST00000342084 TTF2Q9UNY4 1162 aaKnown RBP8.19□□□□□ -1.1
PTPRR-202ENST00000342084 M0R2N6 131 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 STXBP3O00186 592 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 SRGAP2O75044 1071 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 N4BP1O75113 896 aaKnown RBP8.18□□□□□ -1.1
PTPRR-202ENST00000342084 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 PLCG1P19174 1290 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 TRAPPC10P48553 1259 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 HERVK_113P62684 666 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 VSNL1P62760 191 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 SBK1Q52WX2 424 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 CCDC178Q5BJE1 867 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 C12orf60Q5U649 245 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 MB21D1Q8N884 522 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 CEP112Q8N8E3 955 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 CCDC51Q96ER9 411 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 NLRP3Q96P20 1036 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 PDE11AQ9HCR9 933 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 RMND1Q9NWS8 449 aa8.18□□□□□ -1.1
PTPRR-202ENST00000342084 SPATA31A5Q5VU36 1347 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 SPATA31A7Q8IWB4 1347 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 LRRC10BA6NIK2 292 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 GNPATO15228 680 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 NDUFA10O95299 355 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 FCER1AP12319 257 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 CALML3P27482 149 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 UBA7P41226 1012 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 HNRNPH2P55795 449 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 GRM4Q14833 912 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 LETM2Q2VYF4 491 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 ARL6IP4Q66PJ3 421 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 WDR59Q6PJI9 974 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 ANKRD20A12PQ8NF67 263 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 TMEM47Q9BQJ4 181 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 VAT1LQ9HCJ6 419 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 MKRN1Q9UHC7 482 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 TNRC6CQ9HCJ0 1690 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 MAST2Q6P0Q8 1798 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 FLT1P17948 1338 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 IRS2Q9Y4H2 1338 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 CCDC151A5D8V7 595 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 RCCD1A6NED2 376 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 LGALS16A8MUM7 142 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 CCNT1O60563 726 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 ATP1A1P05023 1023 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 LDHBP07195 334 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 ERCC3P19447 782 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 SPAG1Q07617 926 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 NFIXQ14938 502 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 TXNRD1Q16881 649 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 SLC10A5Q5PT55 438 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 BEND6Q5SZJ8 279 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 JAKMIP3Q5VZ66 844 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 TTI2Q6NXR4 508 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 USP17L2Q6R6M4 530 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 CAPZA3Q96KX2 299 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 DUSP9Q99956 384 aaKnown RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 AGPAT5Q9NUQ2 364 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 TMEM260Q9NX78 707 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 ANKIB1Q9P2G1 1089 aa8.17□□□□□ -1.1
PTPRR-202ENST00000342084 EPN1Q9Y6I3 576 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-202ENST00000342084 PDS5AQ29RF7 1337 aaKnown RBP8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CTAGE15A4D2H0 777 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 H7C1D1 291 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CTAGE8P0CG41 777 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 TM4SF1P30408 202 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 NAPAP54920 295 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 AMPD2Q01433 879 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 STK4Q13043 487 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 BRD3Q15059 726 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 ANKRD40Q6AI12 368 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 BARGINQ6ZT62 677 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CTAGE6Q86UF2 777 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CABP7Q86V35 215 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CTAGE4Q8IX94 777 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CSGALNACT2Q8N6G5 542 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 MSANTD4Q8NCY6 345 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 ZNF507Q8TCN5 953 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 PCMTD1Q96MG8 357 aaPredicted RBP8.16□□□□□ -1.1
PTPRR-202ENST00000342084 HINFPQ9BQA5 517 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 ANKRD2Q9GZV1 360 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 BARHL2Q9NY43 387 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 MYO6Q9UM54 1294 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 DUSP10Q9Y6W6 482 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 SBF2Q86WG5 1849 aa8.16□□□□□ -1.1
PTPRR-202ENST00000342084 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
PTPRR-202ENST00000342084 CCDC66A2RUB6 948 aa8.15□□□□□ -1.1
PTPRR-202ENST00000342084 KLRF2D3W0D1 207 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms