RNA–Protein interactions for RNA: ENST00000341529.7

CDH5-201, Transcript of cadherin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH5, Length 4,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-201ENST00000341529 ARMCX5Q6P1M9 558 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 MARCH10Q8NA82 808 aaPredicted RBP13.29□□□□□ -0.28
CDH5-201ENST00000341529 LSM14BQ9BX40 385 aaKnown RBP13.29□□□□□ -0.28
CDH5-201ENST00000341529 ZCCHC17Q9NP64 241 aaKnown RBP13.29□□□□□ -0.28
CDH5-201ENST00000341529 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 NCOA3Q9Y6Q9 1424 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 SERPINB2P05120 415 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 PLCG1P19174 1290 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 GRM1Q13255 1194 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 TSGA10IPQ3SY00 556 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 SLC9C1Q4G0N8 1177 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 UBLCP1Q8WVY7 318 aaPredicted RBP13.29□□□□□ -0.28
CDH5-201ENST00000341529 HPS3Q969F9 1004 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 EPB41L4AQ9HCS5 686 aaPredicted RBP13.29□□□□□ -0.28
CDH5-201ENST00000341529 MROH1Q8NDA8 1641 aa13.29□□□□□ -0.28
CDH5-201ENST00000341529 DDAH1O94760 285 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 PLCB3Q01970 1234 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 RESP18Q5W5W9 173 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 METTL16Q86W50 562 aaKnown RBP13.28□□□□□ -0.28
CDH5-201ENST00000341529 LARGE2Q8N3Y3 721 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 TEKT1Q969V4 418 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 PDE11AQ9HCR9 933 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 DCP1AQ9NPI6 582 aaPredicted RBP13.28□□□□□ -0.28
CDH5-201ENST00000341529 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 CLCN6P51797 869 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 MICALL1Q8N3F8 863 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 SELENOOQ9BVL4 669 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 HDAC9Q9UKV0 1011 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 TRIML1Q8N9V2 468 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 UHMK1Q8TAS1 419 aaKnown RBP13.28□□□□□ -0.28
CDH5-201ENST00000341529 ENOX1Q8TC92 643 aaKnown RBP13.28□□□□□ -0.28
CDH5-201ENST00000341529 SELENOSQ9BQE4 189 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 GOLGA6L7A0A1B0GV03 622 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 H7C1D1 291 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 EXOC3O60645 756 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 KRT31Q15323 416 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 MYOCDQ8IZQ8 938 aa13.28□□□□□ -0.28
CDH5-201ENST00000341529 FAM84BQ96KN1 310 aaPredicted RBP13.28□□□□□ -0.28
CDH5-201ENST00000341529 CPDO75976 1380 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 POTEMA6NI47 508 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 EPB41P11171 864 aaKnown RBP13.27□□□□□ -0.28
CDH5-201ENST00000341529 RASSF7Q02833 373 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 TRIM14Q14142 442 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 ASIC2Q16515 512 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 FAM26FQ5R3K3 315 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 PCDHA4Q9UN74 947 aa13.27□□□□□ -0.28
CDH5-201ENST00000341529 WTIPA6NIX2 430 aaPredicted RBP13.27□□□□□ -0.29
CDH5-201ENST00000341529 ANKRD65E5RJM6 399 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 DNM2P50570 870 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 TMTC3Q6ZXV5 915 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 CCDC50Q8IVM0 306 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 PAF1Q8N7H5 531 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 DDX25Q9UHL0 483 aaKnown RBP13.27□□□□□ -0.29
CDH5-201ENST00000341529 AFF2P51816 1311 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 DIP2AQ14689 1571 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 NCAPD2Q15021 1401 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 PPIP5K2O43314 1243 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 SRGAP2O75044 1071 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 KRT5P13647 590 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 CETN2P41208 172 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 FMR1Q06787 632 aaKnown RBP eCLIP13.27□□□□□ -0.29
CDH5-201ENST00000341529 BIRC3Q13489 604 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 NOX5Q96PH1 765 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 ST7Q9NRC1 585 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 TMEM131LA2VDJ0 1609 aa13.27□□□□□ -0.29
CDH5-201ENST00000341529 ARHGEF35A5YM69 484 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 PRPF3O43395 683 aaKnown RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 ERCC5P28715 1186 aaPredicted RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 CDC25BP30305 580 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 ATP1A2P50993 1020 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 CERKLQ49MI3 558 aaPredicted RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 SLFN13Q68D06 897 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 PPP4R3AQ6IN85 833 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 GPR161Q8N6U8 529 aaKnown RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 FAM76AQ8TAV0 307 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 IGDCC4Q8TDY8 1250 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 STAG1Q8WVM7 1258 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 BSDC1Q9NW68 430 aaPredicted RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 GOLGA6L10A0A0M3HER8 536 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 ICA1Q05084 483 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 IFI16Q16666 785 aaKnown RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 HAUS3Q68CZ6 603 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 TMEM260Q9NX78 707 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 MYO1AQ9UBC5 1043 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 DDX41Q9UJV9 622 aaKnown RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 GINS2Q9Y248 185 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 SFI1A8K8P3 1242 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 CLIC2O15247 247 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 KLRK1P26718 216 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 CDK8P49336 464 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 KMT5BQ4FZB7 885 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 GRIPAP1Q4V328 841 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 NBPF11Q86T75 865 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 PANK4Q9NVE7 773 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 TRPC5Q9UL62 973 aaPredicted RBP13.26□□□□□ -0.29
CDH5-201ENST00000341529 HPS5Q9UPZ3 1129 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 FRMD4BQ9Y2L6 1034 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 MROH7-TTC4A0A0A0MT08 1334 aa13.26□□□□□ -0.29
CDH5-201ENST00000341529 KDM4FA0A1W2PPD8 638 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms