RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 SH3RF1Q7Z6J0 888 aa15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 STAG1Q8WVM7 1258 aa15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 GMCL1Q96IK5 515 aa15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 GLT1D1Q96MS3 346 aa15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 ACAD9Q9H845 621 aa15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 STX8Q9UNK0 236 aa15.49■□□□□ 0.07
NECTIN1-203ENST00000341398 KIAA0355O15063 1070 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 C6orf222P0C671 652 aaPredicted RBP15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 SMAD3P84022 425 aaKnown RBP15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 KCNA10Q16322 511 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 ANKRD45Q5TZF3 282 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 ANKRD33Q7Z3H0 272 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 KLHDC9Q8NEP7 349 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 EVI5LQ96CN4 794 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 HOMER2Q9NSB8 354 aa15.48■□□□□ 0.07
NECTIN1-203ENST00000341398 ELP1O95163 1332 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 SYNRGQ9UMZ2 1314 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 ASB14A6NK59 587 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 PLA2G6O60733 806 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 MCCP23508 829 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 CCDC144BQ3MJ40 725 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 C9orf50Q5SZB4 431 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 RCSD1Q6JBY9 416 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 ARMCX2Q7L311 632 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 FAM161BQ96MY7 647 aa15.47■□□□□ 0.07
NECTIN1-203ENST00000341398 RANBP6O60518 1105 aaKnown RBP15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 CST5P28325 142 aaPredicted RBP15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 FPGSQ05932 587 aa15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 GNASQ5JWF2 1037 aa15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 CCDC174Q6PII3 467 aa15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 NOL8Q76FK4 1167 aaKnown RBP15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 TICAM2Q86XR7 235 aa15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 OTUD7AQ8TE49 926 aaPredicted RBP15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 LENG1Q96BZ8 264 aaPredicted RBP15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 RNPC3Q96LT9 517 aaKnown RBP15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 TRERF1Q96PN7 1200 aa15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 HELLSQ9NRZ9 838 aa15.46■□□□□ 0.07
NECTIN1-203ENST00000341398 LAMA2P24043 3122 aaKnown RBP15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 ASGR1P07306 291 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 ALAS1P13196 640 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 GJA9P57773 515 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 CTDSPL2Q05D32 466 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 FAAP100Q0VG06 881 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 CCDC144CPQ8IYA2 1237 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 SEMA6BQ9H3T3 888 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 RNF146Q9NTX7 359 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 ANAPC4Q9UJX5 808 aa15.45■□□□□ 0.06
NECTIN1-203ENST00000341398 VCANP13611 3396 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 A0A0U1RQG5 324 aaPredicted RBP15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 TLR3O15455 904 aaKnown RBP15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 TIMP1P01033 207 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 TNFAIP2Q03169 654 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 ALX1Q15699 326 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 CCSAPQ6IQ19 270 aaPredicted RBP15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 KCTD1Q719H9 257 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 FAM133AQ8N9E0 248 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 AGBL1Q96MI9 1066 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 GUCD1Q96NT3 240 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 UPF3AQ9H1J1 476 aaKnown RBP15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 TOMM22Q9NS69 142 aa15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.44■□□□□ 0.06
NECTIN1-203ENST00000341398 ZEB2O60315 1214 aa15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 RRP1P56182 461 aaKnown RBP15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 CNTN2Q02246 1040 aa15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 CCDC129Q6ZRS4 1044 aa15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 DCAF4Q8WV16 495 aa15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 CHMP4CQ96CF2 233 aa15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 AP5M1Q9H0R1 490 aa15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 A1CFQ9NQ94 594 aaKnown RBP15.43■□□□□ 0.06
NECTIN1-203ENST00000341398 TMEM265A0A087WTH1 108 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 ARVCFO00192 962 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 ORC4O43929 436 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 CABYRO75952 493 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 ITGB8P26012 769 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 CDK7P50613 346 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 PPIGQ13427 754 aaKnown RBP eCLIP15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 CCDC96Q2M329 555 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 MCMDC2Q4G0Z9 681 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 TMEM199Q8N511 208 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 FGD4Q96M96 766 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 CDX2Q99626 313 aaPredicted RBP15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 SEZ6LQ9BYH1 1024 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 IL17RBQ9NRM6 502 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 PRR12Q9ULL5 1215 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 MTMR7Q9Y216 660 aa15.42■□□□□ 0.06
NECTIN1-203ENST00000341398 MYADML2A6NDP7 307 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 PDE1AP54750 535 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 IQSEC1Q6DN90 963 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 MFSD5Q6N075 450 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 INCENPQ9NQS7 918 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 CCPG1Q9ULG6 757 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 ZNF536O15090 1300 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 SALL3Q9BXA9 1300 aa15.41■□□□□ 0.06
NECTIN1-203ENST00000341398 NMT2O60551 498 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 FGAP02671 866 aa15.4■□□□□ 0.06
NECTIN1-203ENST00000341398 FGRP09769 529 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms