RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 ECHDC1Q9NTX5 307 aa16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 ISY1Q9ULR0 285 aaKnown RBP16.47■□□□□ 0.23
UPK3BL1-201ENST00000340457 IGKV6D-41A0A0C4DH26 115 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 APPP05067 770 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 CSF2RAP15509 400 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 PTGS1P23219 599 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 TDO2P48775 406 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 CDK7P50613 346 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 BEX3Q00994 111 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 TMEM240Q5SV17 173 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 MFSD5Q6N075 450 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 CCDC129Q6ZRS4 1044 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 ZNF444Q8N0Y2 327 aaPredicted RBP16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 DDX49Q9Y6V7 483 aaKnown RBP16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 CHD7Q9P2D1 2997 aa16.46■□□□□ 0.23
UPK3BL1-201ENST00000340457 M0R2C6 588 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 ATP2A1O14983 1001 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 GPAA1O43292 621 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 NOL8Q76FK4 1167 aaKnown RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 ZNF467Q7Z7K2 595 aaPredicted RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 CCDC144CPQ8IYA2 1237 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 KBTBD3Q8NAB2 608 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 PCSK9Q8NBP7 692 aaKnown RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 APPBP2Q92624 585 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 ABHD16BQ9H3Z7 469 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 SPC25Q9HBM1 224 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 MTMR4Q9NYA4 1195 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 FEM1BQ9UK73 627 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 ELP1O95163 1332 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 A0A0U1RQG5 324 aaPredicted RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 ARVCFO00192 962 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 RNF113AO15541 343 aaKnown RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 CST5P28325 142 aaPredicted RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 CYP2C18P33260 490 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 GJA9P57773 515 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 PPIGQ13427 754 aaKnown RBP eCLIP16.45■□□□□ 0.224e-13■■□□□ 12.1
UPK3BL1-201ENST00000340457 SLFN13Q68D06 897 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 GIMAP6Q6P9H5 292 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 ZNF365Q70YC5 407 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 PBX4Q9BYU1 374 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 UPF3AQ9H1J1 476 aaKnown RBP16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 PRDM12Q9H4Q4 367 aa16.45■□□□□ 0.22
UPK3BL1-201ENST00000340457 NCOR1O75376 2440 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 MROH7Q68CQ1 1323 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 TMEM232C9JQI7 657 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 CTAGE5O15320 804 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 SNAP25P60880 206 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 FAM126BQ8IXS8 530 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 MKL1Q969V6 931 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 AGBL1Q96MI9 1066 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 KATNBL1Q9H079 304 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 FBXO40Q9UH90 709 aa16.44■□□□□ 0.22
UPK3BL1-201ENST00000340457 ASTN1O14525 1302 aa16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 TTLL1O95922 423 aa16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 BMP3P12645 472 aa16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 IKQ13123 557 aaPredicted RBP16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 CXCL17Q6UXB2 119 aa16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 TMEM199Q8N511 208 aa16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 SEC62Q99442 399 aaKnown RBP16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
UPK3BL1-201ENST00000340457 UMODL1Q5DID0 1318 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 SOWAHBA6NEL2 793 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 TSPY3P0CV98 308 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 TSPY8P0CW00 308 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 TNFAIP2Q03169 654 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 RASIP1Q5U651 963 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 RASGRP2Q7LDG7 609 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 IFNL3Q8IZI9 196 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 GMCL1P1Q8NEA9 526 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 SYMPKQ92797 1274 aaKnown RBP16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 ACAD9Q9H845 621 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 A1CFQ9NQ94 594 aaKnown RBP16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 RNF146Q9NTX7 359 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 CXXC1Q9P0U4 656 aaPredicted RBP16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 RCAN3Q9UKA8 241 aa16.42■□□□□ 0.22
UPK3BL1-201ENST00000340457 REV3LO60673 3130 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 PATL2C9JE40 543 aaKnown RBP16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 TLR3O15455 904 aaKnown RBP16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 ALAS1P13196 640 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 MCCP23508 829 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 OAZ1P54368 228 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 TFAP4Q01664 338 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 CCDC85BQ15834 202 aaPredicted RBP16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 TJAP1Q5JTD0 557 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 TMEM63BQ5T3F8 832 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 CCDC174Q6PII3 467 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 EEPD1Q7L9B9 569 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 FAM133AQ8N9E0 248 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 NEDD1Q8NHV4 660 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 GAS2L1Q99501 681 aaPredicted RBP16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 ZNF287Q9HBT7 754 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 PDGFCQ9NRA1 345 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 MTMR7Q9Y216 660 aa16.41■□□□□ 0.22
UPK3BL1-201ENST00000340457 BDP1A6H8Y1 2624 aa16.4■□□□□ 0.22
UPK3BL1-201ENST00000340457 ZNF536O15090 1300 aa16.4■□□□□ 0.22
UPK3BL1-201ENST00000340457 DYNC1LI2O43237 492 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms