RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 PAWRQ96IZ0 340 aaKnown RBP15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 RAVER2Q9HCJ3 691 aaKnown RBP15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 ZNFX1Q9P2E3 1918 aaKnown RBP15.68■□□□□ 0.1
SIRPB3P-201ENST00000340424 FRMPD3Q5JV73 1810 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 DNAJC25-GNG10A0A024R161 153 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 CNGA1P29973 690 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 ANKRD35Q8N283 1001 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 TINF2Q9BSI4 451 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 C11orf49Q9H6J7 331 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 ACAD9Q9H845 621 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 PRR12Q9ULL5 1215 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 RIPK3Q9Y572 518 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 PLXNA1Q9UIW2 1896 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 SYNGAP1Q96PV0 1343 aa15.67■□□□□ 0.1
SIRPB3P-201ENST00000340424 SGSM2O43147 1006 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 KDM4AO75164 1064 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 PGK2P07205 417 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 SNHG28P0DPA3 235 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 PDHBP11177 359 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 MAMDC4Q6UXC1 1216 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 DIS3LQ8TF46 1054 aaKnown RBP15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 ANKS1AQ92625 1134 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 CNPY2Q9Y2B0 182 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 PFASO15067 1338 aa15.66■□□□□ 0.1
SIRPB3P-201ENST00000340424 DNM1LO00429 736 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 EVI5O60447 810 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 TRDNQ13061 729 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 ARRDC4Q8NCT1 418 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 TRPV1Q8NER1 839 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 ZSCAN10Q96SZ4 725 aaPredicted RBP15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 IL25Q9H293 177 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 RANBP17Q9H2T7 1088 aaKnown RBP15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 KAT14Q9H8E8 782 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 ZNF536O15090 1300 aa15.65■□□□□ 0.1
SIRPB3P-201ENST00000340424 B4E1Z4 1266 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 ICAM1P05362 532 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 COL6A1P12109 1028 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 SLC4A3P48751 1232 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 ZNF543Q08ER8 600 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 SYDE2Q5VT97 1194 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 UBAC1Q9BSL1 405 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 RNF146Q9NTX7 359 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 ZSWIM5Q9P217 1185 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 MTMR7Q9Y216 660 aa15.64■□□□□ 0.09
SIRPB3P-201ENST00000340424 H0YGN5 161 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 BMP2KLQ5H9B9 411 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 PNMA1Q8ND90 353 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 AGBL1Q96MI9 1066 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 TRERF1Q96PN7 1200 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 ZKSCAN3Q9BRR0 538 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 CCPG1Q9ULG6 757 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 TNKSO95271 1327 aa15.63■□□□□ 0.09
SIRPB3P-201ENST00000340424 RARBP10826 455 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 ALAS1P13196 640 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 AKR1A1P14550 325 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 ASPRV1Q53RT3 343 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 CCDC174Q6PII3 467 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 KIAA1211Q6ZU35 1233 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 RASGRP2Q7LDG7 609 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 ENAHQ8N8S7 591 aaPredicted RBP15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 MAP4K1Q92918 833 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 GPCPD1Q9NPB8 672 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 HOMER2Q9NSB8 354 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 FRMPD2Q68DX3 1309 aaPredicted RBP15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 WDR19Q8NEZ3 1342 aa15.62■□□□□ 0.09
SIRPB3P-201ENST00000340424 KBTBD13C9JR72 458 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 POTEB2H3BUK9 544 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 CYP21A2P08686 494 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 ZNF865P0CJ78 1059 aaPredicted RBP15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 SLC16A2P36021 539 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 PTH1RQ03431 593 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 IFIT1BQ5T764 474 aaKnown RBP15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 TTBK2Q6IQ55 1244 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 RALYLQ86SE5 291 aaKnown RBP15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 FAM133AQ8N9E0 248 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 CHMP4CQ96CF2 233 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 MAF1Q9H063 256 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 ABHD16BQ9H3Z7 469 aa15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 A1CFQ9NQ94 594 aaKnown RBP15.61■□□□□ 0.09
SIRPB3P-201ENST00000340424 CEP290O15078 2479 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 ASB14A6NK59 587 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 NUBP1P53384 320 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 SART3Q15020 963 aaKnown RBP15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 PRAMEF19Q5SWL8 479 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 NCOA7Q8NI08 942 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 XPNPEP3Q9NQH7 507 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 FAM184BQ9ULE4 1060 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 DNAH12Q6ZR08 3092 aa15.6■□□□□ 0.09
SIRPB3P-201ENST00000340424 ALPK3Q96L96 1907 aa15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 ERICH2A1L162 156 aa15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 SNAI1O95863 264 aaPredicted RBP15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 PARP1P09874 1014 aaKnown RBP15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 CASC1Q6TDU7 716 aa15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 ARMCX2Q7L311 632 aa15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 RNF180Q86T96 592 aa15.59■□□□□ 0.09
SIRPB3P-201ENST00000340424 FGD4Q96M96 766 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms