RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 JMJD4Q9H9V9 463 aa19.47■□□□□ 0.71
SFN-201ENST00000339276 VAT1LQ9HCJ6 419 aa19.47■□□□□ 0.71
SFN-201ENST00000339276 RIPK3Q9Y572 518 aa19.47■□□□□ 0.71
SFN-201ENST00000339276 PLXNB2O15031 1838 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 CYTH3O43739 400 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 MAPK4P31152 587 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 AK2P54819 239 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 CDC37Q16543 378 aaPredicted RBP19.46■□□□□ 0.71
SFN-201ENST00000339276 RTN1Q16799 776 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 OTOP1Q7RTM1 612 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 GPR142Q7Z601 462 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 NCAPG2Q86XI2 1143 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 CCAR1Q8IX12 1150 aaKnown RBP19.46■□□□□ 0.71
SFN-201ENST00000339276 CMTR1Q8N1G2 835 aaKnown RBP19.46■□□□□ 0.71
SFN-201ENST00000339276 SHCBP1Q8NEM2 672 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 ALDH8A1Q9H2A2 487 aaPredicted RBP19.46■□□□□ 0.71
SFN-201ENST00000339276 HPS5Q9UPZ3 1129 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 TRIM17Q9Y577 477 aa19.46■□□□□ 0.71
SFN-201ENST00000339276 DOCK3Q8IZD9 2030 aa19.45■□□□□ 0.7
SFN-201ENST00000339276 METAP2P50579 478 aaKnown RBP eCLIP19.45■□□□□ 0.7
SFN-201ENST00000339276 RCAN1P53805 252 aa19.45■□□□□ 0.7
SFN-201ENST00000339276 TMTC3Q6ZXV5 915 aa19.45■□□□□ 0.7
SFN-201ENST00000339276 SRBD1Q8N5C6 995 aaKnown RBP19.45■□□□□ 0.7
SFN-201ENST00000339276 RIOX1Q9H6W3 641 aa19.45■□□□□ 0.7
SFN-201ENST00000339276 MYH6P13533 1939 aa19.45■□□□□ 0.7
SFN-201ENST00000339276 BAZ2BQ9UIF8 2168 aaKnown RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 NID2Q14112 1375 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 SLC25A27O95847 323 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 ICAM1P05362 532 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 PDIA3P30101 505 aaKnown RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 CDC27P30260 824 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 GNAQP50148 359 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 ARHGEF6Q15052 776 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 QRICH1Q2TAL8 776 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 NOL8Q76FK4 1167 aaKnown RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 PLEKHH3Q7Z736 793 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 CTU1Q7Z7A3 348 aaKnown RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 HOMER1Q86YM7 354 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 COA7Q96BR5 231 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 MTMR8Q96EF0 704 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 MROH8Q9H579 483 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 CWC22Q9HCG8 908 aaKnown RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 HOMER2Q9NSB8 354 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 FAM217BQ9NTX9 383 aaPredicted RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
SFN-201ENST00000339276 CCPG1Q9ULG6 757 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 SMCHD1A6NHR9 2005 aa19.44■□□□□ 0.7
SFN-201ENST00000339276 PRKCZQ05513 592 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 PIBF1Q8WXW3 757 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 PIGSQ96S52 555 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 LZTS2Q9BRK4 669 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 SPZ1Q9BXG8 430 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 SRRDQ9UH36 339 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 TPCN1Q9ULQ1 816 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 GABRQQ9UN88 632 aa19.43■□□□□ 0.7
SFN-201ENST00000339276 GNRH1P01148 92 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 ALAS1P13196 640 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 COPB2P35606 906 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 ADD1P35611 737 aaKnown RBP19.42■□□□□ 0.7
SFN-201ENST00000339276 CCT2P78371 535 aaKnown RBP19.42■□□□□ 0.7
SFN-201ENST00000339276 STK3Q13188 491 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 RABEP1Q15276 862 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 ANKRD1Q15327 319 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 USH1GQ495M9 461 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 CCDC82Q8N4S0 544 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 ZNF274Q96GC6 653 aaPredicted RBP19.42■□□□□ 0.7
SFN-201ENST00000339276 NCOA5Q9HCD5 579 aaKnown RBP19.42■□□□□ 0.7
SFN-201ENST00000339276 RNF146Q9NTX7 359 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 IVNS1ABPQ9Y6Y0 642 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 ZNF236Q9UL36 1845 aa19.42■□□□□ 0.7
SFN-201ENST00000339276 ZBTB5O15062 677 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 PPP1R11O60927 126 aaPredicted RBP19.41■□□□□ 0.7
SFN-201ENST00000339276 PTPREP23469 700 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 HOXD10P28358 340 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 SMARCA1P28370 1054 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 TRERF1Q96PN7 1200 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 GJD2Q9UKL4 321 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 CNTNAP5Q8WYK1 1306 aa19.41■□□□□ 0.7
SFN-201ENST00000339276 FLT3LGP49771 235 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 FUT2Q10981 343 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 GRB14Q14449 540 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 MUM1L1Q5H9M0 696 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 MORN1Q5T089 497 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 COL13A1Q5TAT6 717 aaPredicted RBP19.4■□□□□ 0.7
SFN-201ENST00000339276 FBXO11Q86XK2 927 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 CHST13Q8NET6 341 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 ACAD9Q9H845 621 aa19.4■□□□□ 0.7
SFN-201ENST00000339276 CCDC196A0A1B0GTZ2 297 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 hCG_1642624A0A1W2PR95 340 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 SLC15A5A6NIM6 579 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 LARGE1O95461 756 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 PPP2R5BQ15173 497 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 SOCS4Q8WXH5 440 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 RRP36Q96EU6 259 aaKnown RBP19.39■□□□□ 0.69
SFN-201ENST00000339276 MMP19Q99542 508 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 NUDT12Q9BQG2 462 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 FBXO40Q9UH90 709 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 PTPN22Q9Y2R2 807 aa19.39■□□□□ 0.69
SFN-201ENST00000339276 PTCH2Q9Y6C5 1203 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms