RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 SNAP25P60880 206 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 CCDC96Q2M329 555 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 OLFML2BQ68BL8 750 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.94■□□□□ 0.462e-15■■■■■ 44.8
PRKN-201ENST00000338468 IQCA1Q86XH1 822 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 TRPV1Q8NER1 839 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 RBM8AQ9Y5S9 174 aaKnown RBP17.94■□□□□ 0.46
PRKN-201ENST00000338468 TNKSO95271 1327 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 FRMPD2Q68DX3 1309 aaPredicted RBP17.94■□□□□ 0.46
PRKN-201ENST00000338468 ZNF543Q08ER8 600 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 IKQ13123 557 aaPredicted RBP17.93■□□□□ 0.46
PRKN-201ENST00000338468 SEC23AQ15436 765 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 ZNF792Q3KQV3 632 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 MFSD14CQ5VZR4 134 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 ANKLE1Q8NAG6 615 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 AGBL1Q96MI9 1066 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 GPCPD1Q9NPB8 672 aa17.93■□□□□ 0.46
PRKN-201ENST00000338468 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 E7EWF7 191 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 TAL1P17542 331 aaPredicted RBP17.92■□□□□ 0.46
PRKN-201ENST00000338468 SLC4A3P48751 1232 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
PRKN-201ENST00000338468 KCTD2Q14681 263 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 CCDC178Q5BJE1 867 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 LHX8Q68G74 356 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 C7orf61Q8IZ16 206 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 PNMA1Q8ND90 353 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 DIS3LQ8TF46 1054 aaKnown RBP17.92■□□□□ 0.46
PRKN-201ENST00000338468 RANBP17Q9H2T7 1088 aaKnown RBP17.92■□□□□ 0.46
PRKN-201ENST00000338468 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
PRKN-201ENST00000338468 ALPK3Q96L96 1907 aa17.92■□□□□ 0.46
PRKN-201ENST00000338468 PLXNA1Q9UIW2 1896 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 CYBAP13498 195 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 BMP8BP34820 402 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 COL9A3Q14050 684 aaPredicted RBP17.91■□□□□ 0.46
PRKN-201ENST00000338468 SYDE2Q5VT97 1194 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 GPR153Q6NV75 609 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 CCDC174Q6PII3 467 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 CHST13Q8NET6 341 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 OGDHLQ9ULD0 1010 aa17.91■□□□□ 0.46
PRKN-201ENST00000338468 DIS3Q9Y2L1 958 aaKnown RBP17.91■□□□□ 0.46
PRKN-201ENST00000338468 SMCHD1A6NHR9 2005 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 GOLGA8HP0CJ92 632 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 NECTIN1Q15223 517 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 FGD4Q96M96 766 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 GDF15Q99988 308 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 KAT14Q9H8E8 782 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 HOMER2Q9NSB8 354 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 SLC5A4Q9NY91 659 aa17.9■□□□□ 0.46
PRKN-201ENST00000338468 ANTXR2P58335 489 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 PRAMEF19Q5SWL8 479 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 KIAA1211Q6ZU35 1233 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 MB21D2Q8IYB1 491 aaPredicted RBP17.89■□□□□ 0.45
PRKN-201ENST00000338468 CPVLQ9H3G5 476 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 SENP2Q9HC62 589 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 RNF146Q9NTX7 359 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 FBXO40Q9UH90 709 aa17.89■□□□□ 0.45
PRKN-201ENST00000338468 ZMYND8Q9ULU4 1186 aaPredicted RBP17.89■□□□□ 0.45
PRKN-201ENST00000338468 FRMPD3Q5JV73 1810 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 SLC27A2O14975 620 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 CDC45O75419 566 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 ICAM1P05362 532 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
PRKN-201ENST00000338468 TRDNQ13061 729 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 TKFCQ3LXA3 575 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 MUM1L1Q5H9M0 696 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 IFIT1BQ5T764 474 aaKnown RBP17.88■□□□□ 0.45
PRKN-201ENST00000338468 CHST3Q7LGC8 479 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 DEFB123Q8N688 67 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 NCOA7Q8NI08 942 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 TINF2Q9BSI4 451 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 ANO2Q9NQ90 1003 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 PPP4R2Q9NY27 417 aa17.88■□□□□ 0.45
PRKN-201ENST00000338468 ALAS1P13196 640 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 GPATCH4Q5T3I0 446 aaKnown RBP17.87■□□□□ 0.45
PRKN-201ENST00000338468 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 CREB3L3Q68CJ9 461 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 ANKRD35Q8N283 1001 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 DDX11Q96FC9 970 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 TRERF1Q96PN7 1200 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 UBA5Q9GZZ9 404 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 C11orf49Q9H6J7 331 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 ACAD9Q9H845 621 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 A1CFQ9NQ94 594 aaKnown RBP17.87■□□□□ 0.45
PRKN-201ENST00000338468 DDX20Q9UHI6 824 aaKnown RBP17.87■□□□□ 0.45
PRKN-201ENST00000338468 CCPG1Q9ULG6 757 aa17.87■□□□□ 0.45
PRKN-201ENST00000338468 LRIT3Q3SXY7 679 aa17.86■□□□□ 0.45
PRKN-201ENST00000338468 MAMDC4Q6UXC1 1216 aa17.86■□□□□ 0.45
PRKN-201ENST00000338468 RALYLQ86SE5 291 aaKnown RBP17.86■□□□□ 0.45
PRKN-201ENST00000338468 FAM133AQ8N9E0 248 aa17.86■□□□□ 0.45
PRKN-201ENST00000338468 IGDCC4Q8TDY8 1250 aa17.86■□□□□ 0.45
PRKN-201ENST00000338468 ASTN1O14525 1302 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 IFIT3O14879 490 aaKnown RBP17.85■□□□□ 0.45
PRKN-201ENST00000338468 SNAI1O95863 264 aaPredicted RBP17.85■□□□□ 0.45
PRKN-201ENST00000338468 LCTP09848 1927 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 CNGA1P29973 690 aa17.85■□□□□ 0.45
PRKN-201ENST00000338468 MAGEA10P43363 369 aaPredicted RBP17.85■□□□□ 0.45
PRKN-201ENST00000338468 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms