RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 SLKQ9H2G2 1235 aaPredicted RBP17.85■□□□□ 0.45
SEC13-201ENST00000337354 MROH8Q9H579 483 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 VAT1LQ9HCJ6 419 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 FAM217BQ9NTX9 383 aaPredicted RBP17.85■□□□□ 0.45
SEC13-201ENST00000337354 TPCN1Q9ULQ1 816 aa17.85■□□□□ 0.45
SEC13-201ENST00000337354 GNRH1P01148 92 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 CDC27P30260 824 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 ADD1P35611 737 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 TKFCQ3LXA3 575 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 CPLX2Q6PUV4 134 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 CTU1Q7Z7A3 348 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 RAB11FIP4Q86YS3 637 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 CPXCR1Q8N123 301 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 SRBD1Q8N5C6 995 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 LARP6Q9BRS8 491 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 MOV10L1Q9BXT6 1211 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 CPVLQ9H3G5 476 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 RAVER2Q9HCJ3 691 aaKnown RBP17.84■□□□□ 0.45
SEC13-201ENST00000337354 ZNF536O15090 1300 aa17.84■□□□□ 0.45
SEC13-201ENST00000337354 ZBTB5O15062 677 aa17.83■□□□□ 0.45
SEC13-201ENST00000337354 CYTH3O43739 400 aa17.83■□□□□ 0.45
SEC13-201ENST00000337354 PFKFB2O60825 505 aa17.83■□□□□ 0.45
SEC13-201ENST00000337354 PLEKHA8P1O95397 391 aa17.83■□□□□ 0.45
SEC13-201ENST00000337354 FCGRTP55899 365 aa17.83■□□□□ 0.45
SEC13-201ENST00000337354 CCT2P78371 535 aaKnown RBP17.83■□□□□ 0.45
SEC13-201ENST00000337354 CDC37Q16543 378 aaPredicted RBP17.83■□□□□ 0.45
SEC13-201ENST00000337354 RRP36Q96EU6 259 aaKnown RBP17.83■□□□□ 0.45
SEC13-201ENST00000337354 MCOLN1Q9GZU1 580 aa17.83■□□□□ 0.45
SEC13-201ENST00000337354 MGAMO43451 1857 aa17.83■□□□□ 0.44
SEC13-201ENST00000337354 PNMA6FA0A0J9YX94 578 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 STRNO43815 780 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 CAPN15O75808 1086 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 ERCC3P19447 782 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 HOXD10P28358 340 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 SNRNP48Q6IEG0 339 aaKnown RBP17.82■□□□□ 0.44
SEC13-201ENST00000337354 CCDC174Q6PII3 467 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 CHST13Q8NET6 341 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 CD99L2Q8TCZ2 262 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 AMNQ9BXJ7 453 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 RBM27Q9P2N5 1060 aaKnown RBP17.82■□□□□ 0.44
SEC13-201ENST00000337354 SEC63Q9UGP8 760 aaKnown RBP17.82■□□□□ 0.44
SEC13-201ENST00000337354 FBXO40Q9UH90 709 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 MYH4Q9Y623 1939 aa17.82■□□□□ 0.44
SEC13-201ENST00000337354 CPLX1O14810 134 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 PEX10O60683 326 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 FMNL1O95466 1100 aaPredicted RBP17.81■□□□□ 0.44
SEC13-201ENST00000337354 IFNAR1P17181 557 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 PSMC4P43686 418 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 SNAP25P60880 206 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 FUT2Q10981 343 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 ME3Q16798 604 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 QRICH1Q2TAL8 776 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 NCAPG2Q86XI2 1143 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 FBXO11Q86XK2 927 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 CCDC82Q8N4S0 544 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 AGBL1Q96MI9 1066 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 PIGSQ96S52 555 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 MAF1Q9H063 256 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 PORCNQ9H237 461 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 SH2B1Q9NRF2 756 aaPredicted RBP17.81■□□□□ 0.44
SEC13-201ENST00000337354 CCPG1Q9ULG6 757 aa17.81■□□□□ 0.44
SEC13-201ENST00000337354 TNPO2O14787 897 aaKnown RBP17.8■□□□□ 0.44
SEC13-201ENST00000337354 CDKL5O76039 1030 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 ECM2O94769 699 aaPredicted RBP17.8■□□□□ 0.44
SEC13-201ENST00000337354 SCRN1Q12765 414 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 STK3Q13188 491 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 NTRK3Q16288 839 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 HOMER1Q86YM7 354 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 ABRAQ8N0Z2 381 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 CMTR1Q8N1G2 835 aaKnown RBP17.8■□□□□ 0.44
SEC13-201ENST00000337354 COA7Q96BR5 231 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 EFCC1Q9HA90 598 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 CWC22Q9HCG8 908 aaKnown RBP17.8■□□□□ 0.44
SEC13-201ENST00000337354 RIPK3Q9Y572 518 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 TRIM17Q9Y577 477 aa17.8■□□□□ 0.44
SEC13-201ENST00000337354 NOL8Q76FK4 1167 aaKnown RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEC13-201ENST00000337354 GPR142Q7Z601 462 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 PLEKHH3Q7Z736 793 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 TRERF1Q96PN7 1200 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 RNF26Q9BY78 433 aaPredicted RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 NCOA5Q9HCD5 579 aaKnown RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 IVNS1ABPQ9Y6Y0 642 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 PRPF3O43395 683 aaKnown RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 ALAS1P13196 640 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 SLC4A3P48751 1232 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 PRMT2P55345 433 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 AKAP17AQ02040 695 aaKnown RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 WDR78Q5VTH9 848 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 TRIM22Q8IYM9 498 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 GTF3C6Q969F1 213 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 ABHD8Q96I13 439 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 TRIM47Q96LD4 638 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 ACAD9Q9H845 621 aa17.79■□□□□ 0.44
SEC13-201ENST00000337354 MRPL11Q9Y3B7 192 aaKnown RBP17.79■□□□□ 0.44
SEC13-201ENST00000337354 ABCB11O95342 1321 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms