RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GSTA5Q7RTV2 222 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 MAPKAPK5Q8IW41 473 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 HDAC9Q9UKV0 1011 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 NECTIN1Q15223 517 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 SLC9C1Q4G0N8 1177 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 KRT25Q7Z3Z0 450 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 STAG1Q8WVM7 1258 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 MTRF1LQ9UGC7 380 aaKnown RBP17.69■□□□□ 0.42
NPHP3-201ENST00000337331 LUC7L3O95232 432 aaKnown RBP17.69■□□□□ 0.42
NPHP3-201ENST00000337331 TNKSO95271 1327 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 SEC24CP53992 1094 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 USP14P54578 494 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 GUCY2DQ02846 1103 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 SEPT14Q6ZU15 432 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 ZNF513Q8N8E2 541 aaPredicted RBP17.69■□□□□ 0.42
NPHP3-201ENST00000337331 NSUN7Q8NE18 718 aaKnown RBP17.69■□□□□ 0.42
NPHP3-201ENST00000337331 PKD2L1Q9P0L9 805 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 BACH1O14867 736 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 ADORA1P30542 326 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 CTNNA1P35221 906 aaKnown RBP17.68■□□□□ 0.42
NPHP3-201ENST00000337331 NOP53Q9NZM5 478 aaKnown RBP17.68■□□□□ 0.42
NPHP3-201ENST00000337331 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.68■□□□□ 0.42
NPHP3-201ENST00000337331 SP4Q02446 784 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 CALCOCO2Q13137 446 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 TSNAXIP1Q2TAA8 658 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 SLC30A9Q6PML9 568 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 CCDC84Q86UT8 332 aaPredicted RBP17.68■□□□□ 0.42
NPHP3-201ENST00000337331 CABP7Q86V35 215 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 OR8K1Q8NGG5 319 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 PPP1R14CQ8TAE6 165 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
NPHP3-201ENST00000337331 TBC1D7Q9P0N9 293 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 PRR36Q9H6K5 1346 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 MAP2K7O14733 419 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 EPB41P11171 864 aaKnown RBP17.68■□□□□ 0.42
NPHP3-201ENST00000337331 CXCR5P32302 372 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 EPHB4P54760 987 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 TRAPPC3LQ5T215 181 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 NOX5Q96PH1 765 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 NLRC4Q9NPP4 1024 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 ZMYM1Q5SVZ6 1142 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 RASIP1Q5U651 963 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 NLRP14Q86W24 1093 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 DDX12PQ92771 950 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 CCDC51Q96ER9 411 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 ANKZF1Q9H8Y5 726 aa17.68■□□□□ 0.42
NPHP3-201ENST00000337331 ZMYM6O95789 1325 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 CHMP2AO43633 222 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 BCAMP50895 628 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 ZBTB38Q8NAP3 1195 aaPredicted RBP17.67■□□□□ 0.42
NPHP3-201ENST00000337331 SGSM3Q96HU1 749 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 IQCGQ9H095 443 aaKnown RBP17.67■□□□□ 0.42
NPHP3-201ENST00000337331 STMN4Q9H169 189 aaPredicted RBP17.67■□□□□ 0.42
NPHP3-201ENST00000337331 PFDN1O60925 122 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 TFRCP02786 760 aaKnown RBP17.67■□□□□ 0.42
NPHP3-201ENST00000337331 PDHBP11177 359 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 GBP1P32455 592 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 PHKA1P46020 1223 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 GYG1P46976 350 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 SEMA3FQ13275 785 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 VWA3BQ502W6 1294 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 MYO1AQ9UBC5 1043 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 FRMD4BQ9Y2L6 1034 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 PTCH1Q13635 1447 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 ATP2A1O14983 1001 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 CCDC26Q8TAB7 109 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 EEF2KMTQ96G04 330 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 TRIM31Q9BZY9 425 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 VIPAS39Q9H9C1 493 aa17.67■□□□□ 0.42
NPHP3-201ENST00000337331 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
NPHP3-201ENST00000337331 RPS8P62241 208 aaKnown RBP17.66■□□□□ 0.42
NPHP3-201ENST00000337331 HAUS3Q68CZ6 603 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 REXO1Q8N1G1 1221 aaKnown RBP17.66■□□□□ 0.42
NPHP3-201ENST00000337331 SPDYE1Q8NFV5 336 aaPredicted RBP17.66■□□□□ 0.42
NPHP3-201ENST00000337331 MTUS1Q9ULD2 1270 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 TOM1O60784 492 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 RNF10Q8N5U6 811 aaKnown RBP17.66■□□□□ 0.42
NPHP3-201ENST00000337331 TGFBRAP1Q8WUH2 860 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 CCT8L2Q96SF2 557 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 NAP1L4Q99733 375 aaKnown RBP17.66■□□□□ 0.42
NPHP3-201ENST00000337331 UBAP1LF5GYI3 381 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 NBPF9Q3BBW0 867 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 FAM53CQ9NYF3 392 aa17.66■□□□□ 0.42
NPHP3-201ENST00000337331 SLC39A14Q15043 492 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 ARHGEF25Q86VW2 580 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 CCDC13Q8IYE1 715 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 CCDC197Q8NCU1 140 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 NSMCE1Q8WV22 266 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 KCNK9Q9NPC2 374 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 USH1CQ9Y6N9 552 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 TNFAIP3P21580 790 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 RNF168Q8IYW5 571 aaPredicted RBP17.65■□□□□ 0.42
NPHP3-201ENST00000337331 ANKRD13CQ8N6S4 541 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 LRRC45Q96CN5 670 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 GBP5Q96PP8 586 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 DNAJC5Q9H3Z4 198 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 GREM2Q9H772 168 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 EPB41L5Q9HCM4 733 aa17.65■□□□□ 0.42
NPHP3-201ENST00000337331 CCNL1Q9UK58 526 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms