RNA–Protein interactions for RNA: ENST00000334841.10

CMC1-201, Transcript of C-X9-C motif containing 1, humanhuman

TSL 3

Gene CMC1, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-201ENST00000334841 INTS4Q96HW7 963 aaKnown RBP17.52■□□□□ 0.4
CMC1-201ENST00000334841 PARK7Q99497 189 aaKnown RBP17.52■□□□□ 0.4
CMC1-201ENST00000334841 HOXC10Q9NYD6 342 aa17.52■□□□□ 0.4
CMC1-201ENST00000334841 PEX10O60683 326 aa17.51■□□□□ 0.39
CMC1-201ENST00000334841 CNMDO75829 334 aa17.51■□□□□ 0.39
CMC1-201ENST00000334841 MAP2K2P36507 400 aa17.51■□□□□ 0.39
CMC1-201ENST00000334841 CCDC174Q6PII3 467 aa17.51■□□□□ 0.39
CMC1-201ENST00000334841 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
CMC1-201ENST00000334841 AIFM3Q96NN9 605 aa17.51■□□□□ 0.39
CMC1-201ENST00000334841 ORC3Q9UBD5 711 aaPredicted RBP17.51■□□□□ 0.39
CMC1-201ENST00000334841 SEC63Q9UGP8 760 aaKnown RBP17.51■□□□□ 0.39
CMC1-201ENST00000334841 ZNF214Q9UL59 606 aaPredicted RBP17.51■□□□□ 0.39
CMC1-201ENST00000334841 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.51■□□□□ 0.39
CMC1-201ENST00000334841 PNMA6FA0A0J9YX94 578 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 DEXIO95424 95 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 HMGN5P82970 282 aaKnown RBP17.5■□□□□ 0.39
CMC1-201ENST00000334841 TMEM132BQ14DG7 1078 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 TAF1CQ15572 869 aaPredicted RBP17.5■□□□□ 0.39
CMC1-201ENST00000334841 PFKFB3Q16875 520 aaPredicted RBP17.5■□□□□ 0.39
CMC1-201ENST00000334841 WWC2Q6AWC2 1192 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 OTUD7BQ6GQQ9 843 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 REM2Q8IYK8 340 aaPredicted RBP17.5■□□□□ 0.39
CMC1-201ENST00000334841 GPKOWQ92917 476 aaPredicted RBP eCLIP17.5■□□□□ 0.39
CMC1-201ENST00000334841 RAVER2Q9HCJ3 691 aaKnown RBP17.5■□□□□ 0.39
CMC1-201ENST00000334841 TXNRD2Q9NNW7 524 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 BTBD7Q9P203 1132 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 RBM27Q9P2N5 1060 aaKnown RBP17.5■□□□□ 0.39
CMC1-201ENST00000334841 SMC3Q9UQE7 1217 aa17.5■□□□□ 0.39
CMC1-201ENST00000334841 ZBED4O75132 1171 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 ICAM1P05362 532 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 HSP90AA1P07900 732 aaKnown RBP17.49■□□□□ 0.39
CMC1-201ENST00000334841 FDX1P10109 184 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 SCG2P13521 617 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 GJB2P29033 226 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 AKAP17AQ02040 695 aaKnown RBP17.49■□□□□ 0.39
CMC1-201ENST00000334841 MB21D1Q8N884 522 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 SPRYD3Q8NCJ5 442 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 SHISA4Q96DD7 197 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 PAGR1Q9BTK6 254 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 RBPJLQ9UBG7 517 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 MYH6P13533 1939 aa17.49■□□□□ 0.39
CMC1-201ENST00000334841 ATP2A1O14983 1001 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 OAZ1P54368 228 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 CRHR2Q13324 411 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 TYW1BQ6NUM6 668 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 HEATR3Q7Z4Q2 680 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 FBXO11Q86XK2 927 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 CPXCR1Q8N123 301 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 GTF3C2Q8WUA4 911 aaPredicted RBP17.48■□□□□ 0.39
CMC1-201ENST00000334841 AGBL1Q96MI9 1066 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 RABGAP1Q9Y3P9 1069 aa17.48■□□□□ 0.39
CMC1-201ENST00000334841 CTDP1Q9Y5B0 961 aaPredicted RBP17.48■□□□□ 0.39
CMC1-201ENST00000334841 STXBP3O00186 592 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 ALDH1A1P00352 501 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 GCLCP48506 637 aaPredicted RBP17.47■□□□□ 0.39
CMC1-201ENST00000334841 USH1GQ495M9 461 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 COA7Q96BR5 231 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 ALG1Q9BT22 464 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 AMNQ9BXJ7 453 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 TEX13BQ9BXU2 312 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 GJB4Q9NTQ9 266 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 MORF4L1Q9UBU8 362 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 CCPG1Q9ULG6 757 aa17.47■□□□□ 0.39
CMC1-201ENST00000334841 RBBP6Q7Z6E9 1792 aaKnown RBP17.46■□□□□ 0.39
CMC1-201ENST00000334841 hCG_1984214I3L0E3 225 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 CA12O43570 354 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 FOSBP53539 338 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 ERVK-9P63128 1117 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 ERVK-24P63145 666 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 SNRNP48Q6IEG0 339 aaKnown RBP17.46■□□□□ 0.39
CMC1-201ENST00000334841 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 ZNF713Q8N859 430 aaPredicted RBP17.46■□□□□ 0.39
CMC1-201ENST00000334841 FAM184AQ8NB25 1140 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 WASF1Q92558 559 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 SPATC1LQ9H0A9 340 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 ZFYVE28Q9HCC9 887 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 BARHL2Q9NY43 387 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 VPS54Q9P1Q0 977 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 CPA4Q9UI42 421 aa17.46■□□□□ 0.39
CMC1-201ENST00000334841 BAZ2BQ9UIF8 2168 aaKnown RBP17.46■□□□□ 0.39
CMC1-201ENST00000334841 TLR2O60603 784 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 BCRP11274 1271 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 STAT3P40763 770 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 PLS1Q14651 629 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 FAM110CQ1W6H9 321 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 PPP1R18Q6NYC8 613 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 DNAJC5GQ8N7S2 189 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 MOV10L1Q9BXT6 1211 aaKnown RBP17.45■□□□□ 0.38
CMC1-201ENST00000334841 R3HDMLQ9H3Y0 253 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 RNF186Q9NXI6 227 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 RIPK3Q9Y572 518 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 PCDHA1Q9Y5I3 950 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 ABCB11O95342 1321 aa17.45■□□□□ 0.38
CMC1-201ENST00000334841 OPLAHO14841 1288 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 ALAS1P13196 640 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 NAPAP54920 295 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 Q3C1V9 767 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 C17orf99Q6UX52 265 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 RIOX2Q8IUF8 465 aa17.44■□□□□ 0.38
CMC1-201ENST00000334841 CFHR5Q9BXR6 569 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms