RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 DDX12PQ92771 950 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 TRAPPC10P48553 1259 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 SLC9C1Q4G0N8 1177 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 ZNF577Q9BSK1 485 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 K7ENM7 598 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 SEPT14Q6ZU15 432 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 SYMPKQ92797 1274 aaKnown RBP16.65■□□□□ 0.26
C9orf47-201ENST00000334490 RNF34Q969K3 372 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 FAM84BQ96KN1 310 aaPredicted RBP16.65■□□□□ 0.26
C9orf47-201ENST00000334490 PRIMPOLQ96LW4 560 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 PABPN1LA6NDY0 278 aaKnown RBP16.65■□□□□ 0.26
C9orf47-201ENST00000334490 LRRIQ4A6NIV6 560 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 ATP2A1O14983 1001 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 PRPF6O94906 941 aaKnown RBP16.65■□□□□ 0.26
C9orf47-201ENST00000334490 FAM160B1Q5W0V3 765 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 FAM160B2Q86V87 743 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 TTC14Q96N46 770 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 PANK4Q9NVE7 773 aa16.65■□□□□ 0.26
C9orf47-201ENST00000334490 POLR3GO15318 223 aaPredicted RBP16.64■□□□□ 0.25
C9orf47-201ENST00000334490 ZNF827Q17R98 1081 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 SPOUT1Q5T280 376 aaKnown RBP16.64■□□□□ 0.25
C9orf47-201ENST00000334490 PRR5LQ6MZQ0 368 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 CEP112Q8N8E3 955 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 TSNARE1Q96NA8 513 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 ADPGKQ9BRR6 497 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 A0A0G2JLW4 131 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 BCRP11274 1271 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 RABGAP1Q9Y3P9 1069 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 KIDINS220Q9ULH0 1771 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 NR5A1Q13285 461 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 FAM26FQ5R3K3 315 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 KRBA2Q6ZNG9 492 aa16.64■□□□□ 0.25
C9orf47-201ENST00000334490 FAM207AQ9NSI2 230 aaPredicted RBP16.64■□□□□ 0.25
C9orf47-201ENST00000334490 CDC37Q16543 378 aaPredicted RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 ARHGAP44Q17R89 818 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 EEPD1Q7L9B9 569 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 CCDC155Q8N6L0 562 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 GOLGA1Q92805 767 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 ATP6V0A1Q93050 837 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 MAK16Q9BXY0 300 aaKnown RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 TMEM63CQ9P1W3 806 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 hCG_1984214I3L0E3 225 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 CAMTA2O94983 1202 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 XRCC5P13010 732 aaKnown RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 LRMPQ12912 555 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 TMED8Q6PL24 325 aaPredicted RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 ZNF713Q8N859 430 aaPredicted RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 NLRC4Q9NPP4 1024 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 MTUS1Q9ULD2 1270 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 TERF1P54274 439 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 CYP26C1Q6V0L0 522 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 PLCD3Q8N3E9 789 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 OTUD6BQ8N6M0 293 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 TSGA10Q9BZW7 698 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 SHTN1A0MZ66 631 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 H0YCG3 227 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 GTPBP6O43824 516 aaPredicted RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 GCFC2P16383 781 aaKnown RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 ITPK1Q13572 414 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 SLC39A14Q15043 492 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.63■□□□□ 0.25
C9orf47-201ENST00000334490 WRNIP1Q96S55 665 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 SLC39A2Q9NP94 309 aa16.63■□□□□ 0.25
C9orf47-201ENST00000334490 KLHL30Q0D2K2 578 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 TICAM2Q86XR7 235 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 DCP1AQ9NPI6 582 aaPredicted RBP16.62■□□□□ 0.25
C9orf47-201ENST00000334490 SNX16P57768 344 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 SLC44A5Q8NCS7 719 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.62■□□□□ 0.25
C9orf47-201ENST00000334490 SSX2IPQ9Y2D8 614 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 ZHX2Q9Y6X8 837 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 CPS1P31327 1500 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 PRPF3O43395 683 aaKnown RBP16.62■□□□□ 0.25
C9orf47-201ENST00000334490 DMP1Q13316 513 aaPredicted RBP16.62■□□□□ 0.25
C9orf47-201ENST00000334490 ZNF34Q8IZ26 560 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 C2orf69Q8N8R5 385 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 CCDC77Q9BR77 488 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 AP5M1Q9H0R1 490 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 ARMCX3Q9UH62 379 aaPredicted RBP16.62■□□□□ 0.25
C9orf47-201ENST00000334490 MROH7-TTC4A0A0A0MT08 1334 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 DIP2AQ14689 1571 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 GNA14O95837 355 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 ZNF75DP51815 510 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 NDUFA8P51970 172 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 ODR4Q5SWX8 454 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 SEL1L2Q5TEA6 688 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 CSRNP2Q9H175 543 aa16.62■□□□□ 0.25
C9orf47-201ENST00000334490 ZHX1Q9UKY1 873 aaPredicted RBP16.62■□□□□ 0.25
C9orf47-201ENST00000334490 LAD1O00515 517 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 CHAMP1Q96JM3 812 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 WDR11Q9BZH6 1224 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 RIPOR2Q9Y4F9 1068 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 HSF2BPO75031 334 aa16.61■□□□□ 0.25
C9orf47-201ENST00000334490 MAGEA1P43355 309 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms