RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 ALPK3Q96L96 1907 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 DNAJC25-GNG10A0A024R161 153 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 SLC4A3P48751 1232 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 SYDE2Q5VT97 1194 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 LHX8Q68G74 356 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 ANKRD35Q8N283 1001 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 MSL3Q8N5Y2 521 aaKnown RBP17.66■□□□□ 0.42
PFDN5-202ENST00000334478 ESYT1Q9BSJ8 1104 aa17.66■□□□□ 0.42
PFDN5-202ENST00000334478 RANBP17Q9H2T7 1088 aaKnown RBP17.66■□□□□ 0.42
PFDN5-202ENST00000334478 DDX20Q9UHI6 824 aaKnown RBP17.66■□□□□ 0.42
PFDN5-202ENST00000334478 ICAM1P05362 532 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 CNGA1P29973 690 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 TTBK2Q6IQ55 1244 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 CASC1Q6TDU7 716 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 NECAB2Q7Z6G3 386 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 ZNF467Q7Z7K2 595 aaPredicted RBP17.65■□□□□ 0.42
PFDN5-202ENST00000334478 RALYLQ86SE5 291 aaKnown RBP17.65■□□□□ 0.42
PFDN5-202ENST00000334478 SKAP1Q86WV1 359 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 AGBL1Q96MI9 1066 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 TINF2Q9BSI4 451 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 GPCPD1Q9NPB8 672 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 HOMER2Q9NSB8 354 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 RNF146Q9NTX7 359 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 PNMA2Q9UL42 364 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 RBM8AQ9Y5S9 174 aaKnown RBP17.65■□□□□ 0.42
PFDN5-202ENST00000334478 PFASO15067 1338 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 SYNGAP1Q96PV0 1343 aa17.65■□□□□ 0.42
PFDN5-202ENST00000334478 LCTP09848 1927 aa17.64■□□□□ 0.42
PFDN5-202ENST00000334478 MCM3APO60318 1980 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 SEPT4O43236 478 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 SLC16A2P36021 539 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 ASPRV1Q53RT3 343 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 IFIT1BQ5T764 474 aaKnown RBP17.64■□□□□ 0.41
PFDN5-202ENST00000334478 CCDC174Q6PII3 467 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 TRPV1Q8NER1 839 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 NCOA7Q8NI08 942 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 PAWRQ96IZ0 340 aaKnown RBP17.64■□□□□ 0.41
PFDN5-202ENST00000334478 CCPG1Q9ULG6 757 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 SMCHD1A6NHR9 2005 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 LRRC37A2A6NM11 1700 aa17.64■□□□□ 0.41
PFDN5-202ENST00000334478 E7EWF7 191 aa17.63■□□□□ 0.41
PFDN5-202ENST00000334478 ALAS1P13196 640 aa17.63■□□□□ 0.41
PFDN5-202ENST00000334478 SEC23AQ15436 765 aa17.63■□□□□ 0.41
PFDN5-202ENST00000334478 MAMDC4Q6UXC1 1216 aa17.63■□□□□ 0.41
PFDN5-202ENST00000334478 DIS3LQ8TF46 1054 aaKnown RBP17.63■□□□□ 0.41
PFDN5-202ENST00000334478 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
PFDN5-202ENST00000334478 LSG1Q9H089 658 aaKnown RBP17.63■□□□□ 0.41
PFDN5-202ENST00000334478 CNPY2Q9Y2B0 182 aa17.63■□□□□ 0.41
PFDN5-202ENST00000334478 ERICH2A1L162 156 aa17.62■□□□□ 0.41
PFDN5-202ENST00000334478 CDC45O75419 566 aa17.62■□□□□ 0.41
PFDN5-202ENST00000334478 CENPBP07199 599 aaPredicted RBP17.62■□□□□ 0.41
PFDN5-202ENST00000334478 MNX1P50219 401 aaPredicted RBP17.62■□□□□ 0.41
PFDN5-202ENST00000334478 SNAP25P60880 206 aa17.62■□□□□ 0.41
PFDN5-202ENST00000334478 SART3Q15020 963 aaKnown RBP17.62■□□□□ 0.41
PFDN5-202ENST00000334478 CYB5R4Q7L1T6 521 aa17.62■□□□□ 0.41
PFDN5-202ENST00000334478 C11orf49Q9H6J7 331 aa17.62■□□□□ 0.41
PFDN5-202ENST00000334478 A1CFQ9NQ94 594 aaKnown RBP17.62■□□□□ 0.41
PFDN5-202ENST00000334478 WDR19Q8NEZ3 1342 aa17.62■□□□□ 0.41
PFDN5-202ENST00000334478 ERICH6BQ5W0A0 696 aa17.61■□□□□ 0.41
PFDN5-202ENST00000334478 DPF3Q92784 378 aa17.61■□□□□ 0.41
PFDN5-202ENST00000334478 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
PFDN5-202ENST00000334478 TAF6LQ9Y6J9 622 aa17.61■□□□□ 0.41
PFDN5-202ENST00000334478 POTEB2H3BUK9 544 aa17.6■□□□□ 0.41
PFDN5-202ENST00000334478 IFIT3O14879 490 aaKnown RBP17.6■□□□□ 0.41
PFDN5-202ENST00000334478 PARP1P09874 1014 aaKnown RBP17.6■□□□□ 0.41
PFDN5-202ENST00000334478 GOLGA8HP0CJ92 632 aa17.6■□□□□ 0.41
PFDN5-202ENST00000334478 MUM1L1Q5H9M0 696 aa17.6■□□□□ 0.41
PFDN5-202ENST00000334478 STOX1Q6ZVD7 989 aa17.6■□□□□ 0.41
PFDN5-202ENST00000334478 FAM133AQ8N9E0 248 aa17.6■□□□□ 0.41
PFDN5-202ENST00000334478 FGD4Q96M96 766 aa17.6■□□□□ 0.41
PFDN5-202ENST00000334478 DNM1LO00429 736 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 COL6A1P12109 1028 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 AKR1A1P14550 325 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 PRAMEF19Q5SWL8 479 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 MB21D2Q8IYB1 491 aaPredicted RBP17.59■□□□□ 0.41
PFDN5-202ENST00000334478 MTA3Q9BTC8 594 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 CYP39A1Q9NYL5 469 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 NR2E3Q9Y5X4 410 aa17.59■□□□□ 0.41
PFDN5-202ENST00000334478 SLC27A2O14975 620 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 ZNF865P0CJ78 1059 aaPredicted RBP17.58■□□□□ 0.4
PFDN5-202ENST00000334478 RARBP10826 455 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 CNTN2Q02246 1040 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 WTAPQ15007 396 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 NECTIN1Q15223 517 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 RNF20Q5VTR2 975 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 ARMCX2Q7L311 632 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 ARRDC4Q8NCT1 418 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 UBA5Q9GZZ9 404 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 ABHD16BQ9H3Z7 469 aa17.58■□□□□ 0.4
PFDN5-202ENST00000334478 ASB14A6NK59 587 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 EVI5O60447 810 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
PFDN5-202ENST00000334478 ANTXR2P58335 489 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 CDC37Q16543 378 aaPredicted RBP17.57■□□□□ 0.4
PFDN5-202ENST00000334478 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 CREB3L3Q68CJ9 461 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 NSMFQ6X4W1 530 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 CCDC144CPQ8IYA2 1237 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 ADGRF4Q8IZF3 695 aa17.57■□□□□ 0.4
PFDN5-202ENST00000334478 MAF1Q9H063 256 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms