RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 RRP36Q96EU6 259 aaKnown RBP21.35■■□□□ 1.01
RFTN1-201ENST00000334133 ZNF287Q9HBT7 754 aa21.35■■□□□ 1.01
RFTN1-201ENST00000334133 DDX4Q9NQI0 724 aaKnown RBP21.35■■□□□ 1.01
RFTN1-201ENST00000334133 SEC63Q9UGP8 760 aaKnown RBP21.35■■□□□ 1.01
RFTN1-201ENST00000334133 AKR1B1P15121 316 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 ARHGAP29Q52LW3 1261 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 THSD7AQ9UPZ6 1657 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 PHLPP2Q6ZVD8 1323 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 ABL1P00519 1130 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 PLCG1P19174 1290 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 PBX1P40424 430 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 DPP8Q6V1X1 898 aaPredicted RBP21.34■■□□□ 1.01
RFTN1-201ENST00000334133 TBCKQ8TEA7 893 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 RWDD2AQ9UIY3 292 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 LY75O60449 1722 aa21.34■■□□□ 1.01
RFTN1-201ENST00000334133 BBOX1O75936 387 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 CASQ1P31415 396 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 CERS5Q8N5B7 392 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 MNS1Q8NEH6 495 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 ZNF397Q8NF99 534 aaPredicted RBP21.33■■□□□ 1.01
RFTN1-201ENST00000334133 ZSWIM4Q9H7M6 989 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 POLRMTO00411 1230 aaKnown RBP21.33■■□□□ 1.01
RFTN1-201ENST00000334133 COPB1P53618 953 aaKnown RBP21.33■■□□□ 1.01
RFTN1-201ENST00000334133 CCDC178Q5BJE1 867 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 TCP11X2Q5H9J9 407 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 SOGA3Q5TF21 947 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 C15orf52Q6ZUT6 534 aaKnown RBP21.33■■□□□ 1.01
RFTN1-201ENST00000334133 NUP88Q99567 741 aaPredicted RBP21.33■■□□□ 1.01
RFTN1-201ENST00000334133 ZMYND12Q9H0C1 365 aa21.33■■□□□ 1.01
RFTN1-201ENST00000334133 DDX60LQ5H9U9 1706 aaKnown RBP21.33■■□□□ 1
RFTN1-201ENST00000334133 MFAP3LO75121 409 aa21.33■■□□□ 1
RFTN1-201ENST00000334133 TXKP42681 527 aa21.33■■□□□ 1
RFTN1-201ENST00000334133 NONOQ15233 471 aaKnown RBP eCLIP21.33■■□□□ 1
RFTN1-201ENST00000334133 ACRBPQ8NEB7 543 aa21.33■■□□□ 1
RFTN1-201ENST00000334133 CTAGE1Q96RT6 745 aa21.33■■□□□ 1
RFTN1-201ENST00000334133 TTF2Q9UNY4 1162 aaKnown RBP21.33■■□□□ 1
RFTN1-201ENST00000334133 ADRA2BP18089 450 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 CABP7Q86V35 215 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 FCHSD1Q86WN1 690 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 POTEDQ86YR6 584 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 PPEF1O14829 653 aaPredicted RBP21.32■■□□□ 1
RFTN1-201ENST00000334133 UBXN1Q04323 297 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 GJA10Q969M2 543 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 SPZ1Q9BXG8 430 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 C6orf50Q9HD87 102 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 KCNQ5Q9NR82 932 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 CDK5RAP2Q96SN8 1893 aa21.32■■□□□ 1
RFTN1-201ENST00000334133 FAM196BA6NMK8 535 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 OR52Z1P0C646 297 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 SLC16A2P36021 539 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 CACNB3P54284 484 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 TMED8Q6PL24 325 aaPredicted RBP21.31■■□□□ 1
RFTN1-201ENST00000334133 IRF2BP1Q8IU81 584 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 PDHBP11177 359 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 PLCG2P16885 1265 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 DAGLBQ8NCG7 672 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 CCDC12Q8WUD4 166 aaPredicted RBP21.31■■□□□ 1
RFTN1-201ENST00000334133 SRRTQ9BXP5 876 aaKnown RBP21.31■■□□□ 1
RFTN1-201ENST00000334133 RMND1Q9NWS8 449 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
RFTN1-201ENST00000334133 PCDHAC2Q9Y5I4 1007 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 MYH8P13535 1937 aa21.31■■□□□ 1
RFTN1-201ENST00000334133 SPATA31A6Q5VVP1 1343 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 MPHOSPH10O00566 681 aaKnown RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 KLRC4O43908 158 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 CCDC175P0C221 793 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 TTBK2Q6IQ55 1244 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 UBXN4Q92575 508 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 PANX2Q96RD6 677 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 ZNF446Q9NWS9 450 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 ADGRG1Q9Y653 693 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 TFRCP02786 760 aaKnown RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 SHROOM1Q2M3G4 852 aaPredicted RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 NEK8Q86SG6 692 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 ADSSL1Q8N142 457 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 TRIM47Q96LD4 638 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 FCER1AP12319 257 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 HSPA1LP34931 641 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 REXO1Q8N1G1 1221 aaKnown RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 PYM1Q9BRP8 204 aaKnown RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 QTRT2Q9H974 415 aaKnown RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 LIMA1Q9UHB6 759 aaKnown RBP21.3■■□□□ 1
RFTN1-201ENST00000334133 MYH1P12882 1939 aa21.3■■□□□ 1
RFTN1-201ENST00000334133 GAKO14976 1311 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 NKRFO15226 690 aaKnown RBP eCLIP21.29■■□□□ 1
RFTN1-201ENST00000334133 ERCC3P19447 782 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 ERVK-24P63145 666 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 CT47A1Q5JQC4 288 aaPredicted RBP21.29■■□□□ 1
RFTN1-201ENST00000334133 PROM2Q8N271 834 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 ZC3H12CQ9C0D7 883 aaKnown RBP21.29■■□□□ 1
RFTN1-201ENST00000334133 USP40Q9NVE5 1235 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 MTMR4Q9NYA4 1195 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 TDP2O95551 362 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 ASIC1P78348 528 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 UBE2SQ16763 222 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 KRT25Q7Z3Z0 450 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 LZTS2Q9BRK4 669 aa21.29■■□□□ 1
RFTN1-201ENST00000334133 DDX41Q9UJV9 622 aaKnown RBP21.29■■□□□ 1
RFTN1-201ENST00000334133 GNA11P29992 359 aa21.28■■□□□ 1
RFTN1-201ENST00000334133 TBC1D22AQ8WUA7 517 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms