RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 USP17L1Q7RTZ2 530 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 LUZP1Q86V48 1076 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 C2CD5Q86YS7 1000 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 PNMA1Q8ND90 353 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 BRMS1Q9HCU9 246 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 ANO10Q9NW15 660 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 NOL7Q9UMY1 257 aaKnown RBP10□□□□□ -0.81
LSAMP-201ENST00000333617 CEP131Q9UPN4 1083 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 DAGLAQ9Y4D2 1042 aa10□□□□□ -0.81
LSAMP-201ENST00000333617 SIPA1L1O43166 1804 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 H0YIN7 160 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 RASA1P20936 1047 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 SYKP43405 635 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 CDK8P49336 464 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 GRM4Q14833 912 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 RESP18Q5W5W9 173 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 STYK1Q6J9G0 422 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 SHC4Q6S5L8 630 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 SLC44A5Q8NCS7 719 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 SHISA4Q96DD7 197 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 TIGD1Q96MW7 591 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 CABP5Q9NP86 173 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
LSAMP-201ENST00000333617 HPSEQ9Y251 543 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 SNED1Q8TER0 1413 aa9.99□□□□□ -0.81
LSAMP-201ENST00000333617 ARFGEF1Q9Y6D6 1849 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 FAM237AA0A1B0GTK4 181 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 F8W031 263 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-201ENST00000333617 GOLGA6L19H0YKK7 550 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 AP5Z1O43299 807 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 DXOO77932 396 aaKnown RBP9.98□□□□□ -0.81
LSAMP-201ENST00000333617 SCG2P13521 617 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 GNAQP50148 359 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 FOXC1Q12948 553 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 ZRSR1Q15695 479 aaKnown RBP9.98□□□□□ -0.81
LSAMP-201ENST00000333617 PFKFB3Q16875 520 aaPredicted RBP9.98□□□□□ -0.81
LSAMP-201ENST00000333617 CLIC6Q96NY7 704 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 PKD2L1Q9P0L9 805 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
LSAMP-201ENST00000333617 TRIM75PA6NK02 468 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 GUCA2AQ02747 115 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 IQCB1Q15051 598 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 SLC15A2Q16348 729 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 CEP57L1Q8IYX8 460 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 CERS5Q8N5B7 392 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 NEDD1Q8NHV4 660 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 TMEM47Q9BQJ4 181 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 NAT10Q9H0A0 1025 aaKnown RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 STK32BQ9NY57 414 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 STX8Q9UNK0 236 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 PCDHB6Q9Y5E3 794 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 GOLGB1Q14789 3259 aaKnown RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 FAM187AA6NFU0 413 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 ATP2B1P20020 1258 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 CALML3P27482 149 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 NLRP5P59047 1200 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 PICALMQ13492 652 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 EZH2Q15910 746 aaKnown RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 LCE2AQ5TA79 106 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 PODNQ7Z5L7 613 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 PIBF1Q8WXW3 757 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 ERCC4Q92889 916 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 LZTS2Q9BRK4 669 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 MXD3Q9BW11 206 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 SH3GLB2Q9NR46 395 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 FAM13BQ9NYF5 915 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 MAD2L2Q9UI95 211 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 FBXO2Q9UK22 296 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 KCNH3Q9ULD8 1083 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 SRPRBQ9Y5M8 271 aaKnown RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 MORC2Q9Y6X9 1032 aaPredicted RBP9.97□□□□□ -0.81
LSAMP-201ENST00000333617 KIF13BQ9NQT8 1826 aa9.97□□□□□ -0.81
LSAMP-201ENST00000333617 MYH7BA7E2Y1 1941 aa9.96□□□□□ -0.81
LSAMP-201ENST00000333617 BECN2A8MW95 431 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 GOLGA6L6A8MZA4 724 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 BMP15O95972 392 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 SCNN1DP51172 638 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 NPY5RQ15761 445 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 HHIPL2Q6UWX4 724 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 TREML4Q6UXN2 200 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 STAG2Q8N3U4 1231 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 TNFRSF25Q93038 417 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 CNKSR1Q969H4 720 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 TEKT1Q969V4 418 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 CAMKK2Q96RR4 588 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 DBNDD1Q9H9R9 158 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 USP40Q9NVE5 1235 aa9.96□□□□□ -0.82
LSAMP-201ENST00000333617 RGS17Q9UGC6 210 aaPredicted RBP9.96□□□□□ -0.82
LSAMP-201ENST00000333617 A0A087WWV3 80 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 PALM3A6NDB9 673 aaPredicted RBP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 FDX1P10109 184 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 TOP1P11387 765 aaKnown RBP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 CHRNA5P30532 468 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 NLRP12P59046 1061 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 FKBP1AP62942 108 aaKnown RBP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 EARS2Q5JPH6 523 aaKnown RBP9.95□□□□□ -0.82
LSAMP-201ENST00000333617 POTEAQ6S8J7 498 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 CNNM3Q8NE01 707 aa9.95□□□□□ -0.82
LSAMP-201ENST00000333617 BPIFA3Q9BQP9 254 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms