RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 TCHHQ07283 1943 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 IGKV6D-41A0A0C4DH26 115 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 FARP2O94887 1054 aaPredicted RBP12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 SGPL1O95470 568 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 SYT1P21579 422 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 MAP2K5Q13163 448 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 GRB14Q14449 540 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 FAM83BQ5T0W9 1011 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 MAP3K21Q5TCX8 1036 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 UBE2Q1Q7Z7E8 422 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 CEP95Q96GE4 821 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 MOV10L1Q9BXT6 1211 aaKnown RBP12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 HELLSQ9NRZ9 838 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 FBXO28Q9NVF7 368 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 HOXC10Q9NYD6 342 aa12.87□□□□□ -0.35
APOBEC3B-201ENST00000333467 MCM3APO60318 1980 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 SLC3A2P08195 630 aaKnown RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 PTPREP23469 700 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 PDE4BQ07343 736 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 NMIQ13287 307 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 PLS1Q14651 629 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 CREB3L3Q68CJ9 461 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZNF589Q86UQ0 364 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 MB21D1Q8N884 522 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 CHMP4CQ96CF2 233 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 JAKMIP1Q96N16 626 aaKnown RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 NAP1L5Q96NT1 182 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 NUP88Q99567 741 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 HMX1Q9NP08 348 aaPredicted RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 NYAP2Q9P242 653 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 RPTORQ8N122 1335 aa12.86□□□□□ -0.35
APOBEC3B-201ENST00000333467 LRRC37A2A6NM11 1700 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 SLC15A5A6NIM6 579 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 OFD1O75665 1012 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 NDUFB10O96000 172 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 TSPY3P0CV98 308 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 TSPY8P0CW00 308 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 ERCC3P19447 782 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 CTDSPL2Q05D32 466 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZNF444Q8N0Y2 327 aaPredicted RBP12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 LRRC47Q8N1G4 583 aaKnown RBP12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 CRISPLD2Q9H0B8 497 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 RBM27Q9P2N5 1060 aaKnown RBP12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 PPP1R9AQ9ULJ8 1098 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 ELP1O95163 1332 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 CEP290O15078 2479 aa12.85□□□□□ -0.35
APOBEC3B-201ENST00000333467 CACNB2Q08289 660 aaPredicted RBP12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 TMEM132BQ14DG7 1078 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 MCMDC2Q4G0Z9 681 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 FAM47AQ5JRC9 791 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 BLOC1S2Q6QNY1 142 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 NOL8Q76FK4 1167 aaKnown RBP12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 SHCBP1Q8NEM2 672 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 MTMR4Q9NYA4 1195 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 FLRT1Q9NZU1 646 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 LCTP09848 1927 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
APOBEC3B-201ENST00000333467 F5H6K3 240 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 TTLL1O95922 423 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 TFRCP02786 760 aaKnown RBP12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 HOXC6P09630 235 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 GJB2P29033 226 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 ADORA2AP29274 412 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 CCND3P30281 292 aaPredicted RBP12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 PTH1RQ03431 593 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 KLRC3Q07444 240 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 NCAPG2Q86XI2 1143 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 NEDD1Q8NHV4 660 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 NPLOC4Q8TAT6 608 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 DIS3LQ8TF46 1054 aaKnown RBP12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 CLIP2Q9UDT6 1046 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 ZNF214Q9UL59 606 aaPredicted RBP12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 ADAMTS5Q9UNA0 930 aa12.83□□□□□ -0.35
APOBEC3B-201ENST00000333467 MYH6P13533 1939 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 TSPY2A6NKD2 308 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 VWA5AO00534 786 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLC27A2O14975 620 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 TFAP4Q01664 338 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 REPS2Q8NFH8 660 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 FOXD4L4Q8WXT5 416 aaPredicted RBP12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 SLF1Q9BQI6 1058 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 MROH8Q9H579 483 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 ANAPC4Q9UJX5 808 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 TACC3Q9Y6A5 838 aa12.83□□□□□ -0.36
APOBEC3B-201ENST00000333467 HMGB1P09429 215 aaKnown RBP12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 HSPD1P10809 573 aaKnown RBP12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 RPS6KB1P23443 525 aa12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 KRT85P78386 507 aa12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 GMCL1P1Q8NEA9 526 aa12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 MKL1Q969V6 931 aa12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 HTATIP2Q9BUP3 242 aa12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 INCENPQ9NQS7 918 aa12.82□□□□□ -0.36
APOBEC3B-201ENST00000333467 MTMR6Q9Y217 621 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms