RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 BMS1Q14692 1282 aaKnown RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 RSRC2Q7L4I2 434 aaKnown RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 AMIGO3Q86WK7 504 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 GPR161Q8N6U8 529 aaKnown RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 TGFBRAP1Q8WUH2 860 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 RPGRQ92834 1020 aaKnown RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 GPKOWQ92917 476 aaPredicted RBP eCLIP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 DHTKD1Q96HY7 919 aaPredicted RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 RBM17Q96I25 401 aaKnown RBP12.11□□□□□ -0.47
CCDC172-201ENST00000333254 CRAMP1Q96RY5 1269 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 C6orf50Q9HD87 102 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 MYH4Q9Y623 1939 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 FLT1P17948 1338 aa12.11□□□□□ -0.47
CCDC172-201ENST00000333254 USP17L3A6NCW0 530 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 USP17L4A6NCW7 530 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 KCNJ18B7U540 433 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 KLRF2D3W0D1 207 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 N4BP3O15049 544 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 URI1O94763 535 aaPredicted RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 PARP1P09874 1014 aaKnown RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 CASP1P29466 404 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 UBA7P41226 1012 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 STX17P56962 302 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 RHBDL3P58872 404 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 ST5P78524 1137 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 GPSM2P81274 684 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 KCNJ12Q14500 433 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 NONOQ15233 471 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 DIXDC1Q155Q3 683 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 HSP90AA4PQ58FG1 418 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 JAKMIP3Q5VZ66 844 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 FOXR2Q6PJQ5 311 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 USP17L1Q7RTZ2 530 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 GIMAP8Q8ND71 665 aaPredicted RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 CCDC47Q96A33 483 aaKnown RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 EYA3Q99504 573 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 RIOX1Q9H6W3 641 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 GGA1Q9UJY5 639 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 USP21Q9UK80 565 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 PSMA7O14818 248 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 ADAMTS3O15072 1205 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 NPHP1O15259 732 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 OR52Z1P0C646 297 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 PRCPP42785 496 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 GRIK5Q16478 980 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 ARHGAP29Q52LW3 1261 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 CYP26C1Q6V0L0 522 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 RAD9BQ6WBX8 426 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 ZNF662Q6ZS27 426 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 SMYD4Q8IYR2 804 aaPredicted RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 RABGGTAQ92696 567 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 RRP36Q96EU6 259 aaKnown RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 WDR24Q96S15 920 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 C7orf25Q9BPX7 421 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 BLZF1Q9H2G9 400 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 MRPL44Q9H9J2 332 aaKnown RBP12.1□□□□□ -0.47
CCDC172-201ENST00000333254 ABHD10Q9NUJ1 306 aa12.1□□□□□ -0.47
CCDC172-201ENST00000333254 LGALS16A8MUM7 142 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 KIF5CO60282 957 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 UFL1O94874 794 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
CCDC172-201ENST00000333254 SNHG28P0DPA3 235 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 CASP14P31944 242 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 CLCN6P51797 869 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 KARSQ15046 597 aaKnown RBP12.09□□□□□ -0.47
CCDC172-201ENST00000333254 INF2Q27J81 1249 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 ASPRV1Q53RT3 343 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 FAM196AQ6ZSG2 479 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 SMIM5Q71RC9 77 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 HEATR3Q7Z4Q2 680 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 NEK8Q86SG6 692 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 CARD6Q9BX69 1037 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 STX8Q9UNK0 236 aa12.09□□□□□ -0.47
CCDC172-201ENST00000333254 ATAD5Q96QE3 1844 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 ARFGEF1Q9Y6D6 1849 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 IGKV6D-41A0A0C4DH26 115 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 BICDL2A1A5D9 508 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 SOWAHDA6NJG2 315 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 FXR1P51114 621 aaKnown RBP eCLIP12.08□□□□□ -0.48
CCDC172-201ENST00000333254 NAPAP54920 295 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 AMPD3Q01432 767 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 PPP2R3AQ06190 1150 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 SLC27A3Q5K4L6 730 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 TTI2Q6NXR4 508 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 IRF2BP1Q8IU81 584 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 MAPKAPK5Q8IW41 473 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 FAM114A1Q8IWE2 563 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 LRRN4CLQ8ND94 238 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 ZNF507Q8TCN5 953 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 STK17AQ9UEE5 414 aa12.08□□□□□ -0.48
CCDC172-201ENST00000333254 SEC63Q9UGP8 760 aaKnown RBP12.08□□□□□ -0.48
CCDC172-201ENST00000333254 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms