RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 SP3Q02447 781 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 RIOX2Q8IUF8 465 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 ZNF296Q8WUU4 475 aaPredicted RBP18.65■□□□□ 0.58
LRRC28-202ENST00000331450 MOV10L1Q9BXT6 1211 aaKnown RBP18.65■□□□□ 0.58
LRRC28-202ENST00000331450 TEX13BQ9BXU2 312 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 PLXNA1Q9UIW2 1896 aa18.65■□□□□ 0.58
LRRC28-202ENST00000331450 PFKFB2O60825 505 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 FKTNO75072 461 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CD2BP2O95400 341 aaKnown RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 ICAM1P05362 532 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CTGFP29279 349 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 ADD1P35611 737 aaKnown RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CTCFP49711 727 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 LACTBP83111 547 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CAP1Q01518 475 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 NTRK3Q16288 839 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CDC37Q16543 378 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 ME3Q16798 604 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 NOL8Q76FK4 1167 aaKnown RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CMTR1Q8N1G2 835 aaKnown RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 SHCBP1Q8NEM2 672 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 PORCNQ9H237 461 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 NCOA5Q9HCD5 579 aaKnown RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 RAVER2Q9HCJ3 691 aaKnown RBP18.64■□□□□ 0.57
LRRC28-202ENST00000331450 DOCK3Q8IZD9 2030 aa18.64■□□□□ 0.57
LRRC28-202ENST00000331450 CCDC196A0A1B0GTZ2 297 aa18.63■□□□□ 0.57
LRRC28-202ENST00000331450 ST18O60284 1047 aa18.63■□□□□ 0.57
LRRC28-202ENST00000331450 CCNA1P78396 465 aa18.63■□□□□ 0.57
LRRC28-202ENST00000331450 QRICH1Q2TAL8 776 aa18.63■□□□□ 0.57
LRRC28-202ENST00000331450 SNRNP48Q6IEG0 339 aaKnown RBP18.63■□□□□ 0.57
LRRC28-202ENST00000331450 CPXCR1Q8N123 301 aa18.63■□□□□ 0.57
LRRC28-202ENST00000331450 LIMCH1Q9UPQ0 1083 aa18.63■□□□□ 0.57
LRRC28-202ENST00000331450 ZBTB5O15062 677 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 DHX16O60231 1041 aaKnown RBP18.62■□□□□ 0.57
LRRC28-202ENST00000331450 PPP1R11O60927 126 aaPredicted RBP18.62■□□□□ 0.57
LRRC28-202ENST00000331450 STAT3P40763 770 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 CCT2P78371 535 aaKnown RBP18.62■□□□□ 0.57
LRRC28-202ENST00000331450 ST3GAL1Q11201 340 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 SCRN1Q12765 414 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 STK3Q13188 491 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 PLS1Q14651 629 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 CCDC174Q6PII3 467 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 GTF3C6Q969F1 213 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 AGBL1Q96MI9 1066 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 PIGSQ96S52 555 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 VAT1LQ9HCJ6 419 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 RIPK3Q9Y572 518 aa18.62■□□□□ 0.57
LRRC28-202ENST00000331450 CTDP1Q9Y5B0 961 aaPredicted RBP18.62■□□□□ 0.57
LRRC28-202ENST00000331450 SLC25A27O95847 323 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 IFNAR1P17181 557 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 MAPK4P31152 587 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 COPB2P35606 906 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 LBX1P52954 281 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.61■□□□□ 0.57
LRRC28-202ENST00000331450 CD99L2Q8TCZ2 262 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 ERO1AQ96HE7 468 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 ARHGAP39Q9C0H5 1083 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 SLKQ9H2G2 1235 aaPredicted RBP18.61■□□□□ 0.57
LRRC28-202ENST00000331450 EFCC1Q9HA90 598 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 PNMA2Q9UL42 364 aa18.61■□□□□ 0.57
LRRC28-202ENST00000331450 TAL1P17542 331 aaPredicted RBP18.6■□□□□ 0.57
LRRC28-202ENST00000331450 ERCC3P19447 782 aa18.6■□□□□ 0.57
LRRC28-202ENST00000331450 HOMER1Q86YM7 354 aa18.6■□□□□ 0.57
LRRC28-202ENST00000331450 CCDC82Q8N4S0 544 aa18.6■□□□□ 0.57
LRRC28-202ENST00000331450 RRP36Q96EU6 259 aaKnown RBP18.6■□□□□ 0.57
LRRC28-202ENST00000331450 TRIM47Q96LD4 638 aa18.6■□□□□ 0.57
LRRC28-202ENST00000331450 ZSCAN31Q96LW9 406 aaPredicted RBP18.6■□□□□ 0.57
LRRC28-202ENST00000331450 MROH8Q9H579 483 aa18.6■□□□□ 0.57
LRRC28-202ENST00000331450 CCPG1Q9ULG6 757 aa18.6■□□□□ 0.57
LRRC28-202ENST00000331450 PNMA6FA0A0J9YX94 578 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 PSMC4P43686 418 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 MCM2P49736 904 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 TKFCQ3LXA3 575 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 FBXO11Q86XK2 927 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 NECAB1Q8N987 351 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 AMNQ9BXJ7 453 aa18.59■□□□□ 0.57
LRRC28-202ENST00000331450 RNF26Q9BY78 433 aaPredicted RBP18.59■□□□□ 0.57
LRRC28-202ENST00000331450 SH2B1Q9NRF2 756 aaPredicted RBP18.59■□□□□ 0.57
LRRC28-202ENST00000331450 LRRC37A2A6NM11 1700 aa18.58■□□□□ 0.57
LRRC28-202ENST00000331450 CTDNEP1O95476 244 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 FCGRTP55899 365 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 KIF22Q14807 665 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 GPR142Q7Z601 462 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 NCAPG2Q86XI2 1143 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 CHST13Q8NET6 341 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 PHKBQ93100 1093 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 RNF146Q9NTX7 359 aa18.58■□□□□ 0.56
LRRC28-202ENST00000331450 ABCB11O95342 1321 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 PRPF3O43395 683 aaKnown RBP18.57■□□□□ 0.56
LRRC28-202ENST00000331450 ALAS1P13196 640 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 USH1GQ495M9 461 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 MUM1L1Q5H9M0 696 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 PLEKHH3Q7Z736 793 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 CLEC4DQ8WXI8 215 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 PIBF1Q8WXW3 757 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 PRDM10Q9NQV6 1147 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 RBM27Q9P2N5 1060 aaKnown RBP18.57■□□□□ 0.56
LRRC28-202ENST00000331450 SEC63Q9UGP8 760 aaKnown RBP18.57■□□□□ 0.56
LRRC28-202ENST00000331450 FBXO40Q9UH90 709 aa18.57■□□□□ 0.56
LRRC28-202ENST00000331450 STK36Q9NRP7 1315 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms