RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 B4E1Z4 1266 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 E7EVH7 732 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 EYA2O00167 538 aa27.08■■□□□ 1.93
SOX1-201ENST00000330949 TCP1P17987 556 aaKnown RBP27.08■■□□□ 1.93
SOX1-201ENST00000330949 GLE1Q53GS7 698 aaKnown RBP27.08■■□□□ 1.93
SOX1-201ENST00000330949 ZNF233A6NK53 670 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 RTN2O75298 545 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 TACC1O75410 805 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 PDHBP11177 359 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 GUCY1A2P33402 732 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 CCDC181Q5TID7 509 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 C8orf74Q6P047 294 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 CCDC43Q96MW1 224 aaKnown RBP27.08■■□□□ 1.92
SOX1-201ENST00000330949 ZNF142P52746 1687 aaPredicted RBP27.08■■□□□ 1.92
SOX1-201ENST00000330949 ADAMTS7Q9UKP4 1686 aa27.08■■□□□ 1.92
SOX1-201ENST00000330949 TRIM75PA6NK02 468 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 HMGB1P1B2RPK0 211 aaPredicted RBP27.07■■□□□ 1.92
SOX1-201ENST00000330949 H7C1W4 665 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 LIFRP42702 1097 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 MATR3P43243 847 aaKnown RBP eCLIP27.07■■□□□ 1.92
SOX1-201ENST00000330949 PPARAQ07869 468 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 ZKSCAN8Q15776 578 aaPredicted RBP27.07■■□□□ 1.92
SOX1-201ENST00000330949 PPP4R3AQ6IN85 833 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 FAM89AQ96GI7 184 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 NHEJ1Q9H9Q4 299 aaPredicted RBP27.07■■□□□ 1.92
SOX1-201ENST00000330949 H7C1D1 291 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 IBSPP21815 317 aaPredicted RBP27.07■■□□□ 1.92
SOX1-201ENST00000330949 SCARF1Q14162 830 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 IFT20Q8IY31 132 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 FERMT2Q96AC1 680 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 ATP6V1G3Q96LB4 118 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 SCLT1Q96NL6 688 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 CABP5Q9NP86 173 aa27.07■■□□□ 1.92
SOX1-201ENST00000330949 CYFIP2Q96F07 1278 aa27.06■■□□□ 1.92
SOX1-201ENST00000330949 DUSP10Q9Y6W6 482 aa27.06■■□□□ 1.92
SOX1-201ENST00000330949 TLDC1Q6P9B6 456 aa27.06■■□□□ 1.92
SOX1-201ENST00000330949 ARFGAP2Q8N6H7 521 aa27.06■■□□□ 1.92
SOX1-201ENST00000330949 SLC24A3Q9HC58 644 aa27.06■■□□□ 1.92
SOX1-201ENST00000330949 PARP1P09874 1014 aaKnown RBP27.05■■□□□ 1.92
SOX1-201ENST00000330949 PAFAH1B1P43034 410 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 NAIF1Q69YI7 327 aaPredicted RBP27.05■■□□□ 1.92
SOX1-201ENST00000330949 FAM228AQ86W67 206 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.05■■□□□ 1.92
SOX1-201ENST00000330949 TPX2Q9ULW0 747 aaKnown RBP27.05■■□□□ 1.92
SOX1-201ENST00000330949 USO1O60763 962 aaKnown RBP27.05■■□□□ 1.92
SOX1-201ENST00000330949 DEXIO95424 95 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 SLC8A3P57103 927 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 TAX1BP1Q86VP1 789 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 MREGQ8N565 214 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 NKX2-3Q8TAU0 364 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 CEP126Q9P2H0 1117 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 HYOU1Q9Y4L1 999 aa27.05■■□□□ 1.92
SOX1-201ENST00000330949 PES1O00541 588 aaKnown RBP27.04■■□□□ 1.92
SOX1-201ENST00000330949 OSBPL9Q96SU4 736 aa27.04■■□□□ 1.92
SOX1-201ENST00000330949 BMP15O95972 392 aa27.04■■□□□ 1.92
SOX1-201ENST00000330949 MYH7P12883 1935 aa27.04■■□□□ 1.92
SOX1-201ENST00000330949 ANKRD18BA2A2Z9 1011 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 CIAO1O76071 339 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 PAK2Q13177 524 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 SPA17Q15506 151 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 ZNF658Q5TYW1 1059 aaPredicted RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 NUP58Q9BVL2 599 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 POLD4Q9HCU8 107 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 RMND1Q9NWS8 449 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 VPS54Q9P1Q0 977 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 NUTM2BA6NNL0 878 aaPredicted RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 NUTM2EB1AL46 878 aaPredicted RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 EEF1GP26641 437 aaKnown RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 GBP2P32456 591 aaPredicted RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 MRPS25P82663 173 aaKnown RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 CCDC57Q2TAC2 916 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 RETREG2Q8NC44 543 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 ZNF507Q8TCN5 953 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 KAT6BQ8WYB5 2073 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 PDS5AQ29RF7 1337 aaKnown RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 SSBP05455 408 aaKnown RBP eCLIP27.03■■□□□ 1.92
SOX1-201ENST00000330949 ITGB3BPQ13352 177 aaPredicted RBP27.03■■□□□ 1.92
SOX1-201ENST00000330949 NBPF9Q3BBW0 867 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 PRDM11Q9NQV5 511 aa27.03■■□□□ 1.92
SOX1-201ENST00000330949 NID2Q14112 1375 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 XDHP47989 1333 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 ANKRD20A8PQ5CZ79 823 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 RSRC1Q96IZ7 334 aaKnown RBP27.02■■□□□ 1.92
SOX1-201ENST00000330949 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.02■■□□□ 1.92
SOX1-201ENST00000330949 ALS2Q96Q42 1657 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 TRIM21P19474 475 aaKnown RBP27.02■■□□□ 1.92
SOX1-201ENST00000330949 DNM2P50570 870 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 SARNPP82979 210 aaKnown RBP27.02■■□□□ 1.92
SOX1-201ENST00000330949 NAA25Q14CX7 972 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 CCDC96Q2M329 555 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 RCSD1Q6JBY9 416 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 HAUS2Q9NVX0 235 aa27.02■■□□□ 1.92
SOX1-201ENST00000330949 ABCC12Q96J65 1359 aa27.01■■□□□ 1.92
SOX1-201ENST00000330949 ECM2O94769 699 aaPredicted RBP27.01■■□□□ 1.91
SOX1-201ENST00000330949 E2F5Q15329 346 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 OXER1Q8TDS5 423 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 STAMQ92783 540 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 P3H4Q92791 437 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 ALS2CR12Q96Q35 445 aa27.01■■□□□ 1.91
SOX1-201ENST00000330949 PYM1Q9BRP8 204 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms