RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 KIFC2Q96AC6 838 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 GMCL1Q96IK5 515 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 TCEANC2Q96MN5 208 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 ZNF214Q9UL59 606 aaPredicted RBP19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 SYNPO2Q9UMS6 1093 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 RIPK3Q9Y572 518 aa19.09■□□□□ 0.65
PDLIM1-201ENST00000329399 GJB2P29033 226 aa19.08■□□□□ 0.64
PDLIM1-201ENST00000329399 PDIA3P30101 505 aaKnown RBP19.08■□□□□ 0.64
PDLIM1-201ENST00000329399 A0A0G2JMZ2 1700 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 SH2B2O14492 632 aaPredicted RBP19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 STX6O43752 255 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 TOP1P11387 765 aaKnown RBP19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 PTPREP23469 700 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 SLC1A4P43007 532 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 ANTXR2P58335 489 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 SYNE3Q6ZMZ3 975 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 MB21D1Q8N884 522 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 ENAHQ8N8S7 591 aaPredicted RBP19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 PRPF38AQ8NAV1 312 aaKnown RBP19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 SENP2Q9HC62 589 aa19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 COL11A1P12107 1806 aaPredicted RBP19.07■□□□□ 0.64
PDLIM1-201ENST00000329399 CDKL5O76039 1030 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 EN2P19622 333 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 SLC16A2P36021 539 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 CCNA1P78396 465 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 APOBRQ0VD83 1088 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 NBR1Q14596 966 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 SKOR2Q2VWA4 1001 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 CPLX2Q6PUV4 134 aaKnown RBP19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 CHST3Q7LGC8 479 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 NBPF11Q86T75 865 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 CCAR1Q8IX12 1150 aaKnown RBP19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 SMARCC2Q8TAQ2 1214 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 IGDCC4Q8TDY8 1250 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 TRIB2Q92519 343 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 ZSCAN10Q96SZ4 725 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 NUDT12Q9BQG2 462 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 FLRT1Q9NZU1 646 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 FEM1BQ9UK73 627 aa19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 FRMPD2Q68DX3 1309 aaPredicted RBP19.06■□□□□ 0.64
PDLIM1-201ENST00000329399 INHAP05111 366 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 TAL1P17542 331 aaPredicted RBP19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 STAT3P40763 770 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 RGS19P49795 217 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 IQCA1Q86XH1 822 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 NCAPG2Q86XI2 1143 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 CPXCR1Q8N123 301 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 NECAB1Q8N987 351 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 NPLOC4Q8TAT6 608 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 PXYLP1Q8TE99 480 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 LARP6Q9BRS8 491 aaKnown RBP19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 UNC93B1Q9H1C4 597 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 SLC38A10Q9HBR0 1119 aa19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 RAVER2Q9HCJ3 691 aaKnown RBP19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 BIN2Q9UBW5 565 aaPredicted RBP19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 ISY1Q9ULR0 285 aaKnown RBP19.05■□□□□ 0.64
PDLIM1-201ENST00000329399 IFIT3O14879 490 aaKnown RBP19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 COBLO75128 1261 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 ZSCAN22P10073 491 aaPredicted RBP19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 PDHBP11177 359 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 SYT1P21579 422 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 ST3GAL1Q11201 340 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 SCRN1Q12765 414 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 GRB14Q14449 540 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 SEC23AQ15436 765 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 TMEM67Q5HYA8 995 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 LARP1BQ659C4 914 aaKnown RBP19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 DGKHQ86XP1 1220 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 SLAIN1Q8ND83 568 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 ANKS1AQ92625 1134 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 UBAC1Q9BSL1 405 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 LRRC2Q9BYS8 371 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 CPVLQ9H3G5 476 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 GPCPD1Q9NPB8 672 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 GPHNQ9NQX3 736 aaPredicted RBP19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 SMCHD1A6NHR9 2005 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 NID2Q14112 1375 aa19.04■□□□□ 0.64
PDLIM1-201ENST00000329399 KLF18A0A0U1RQI7 1052 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 CCDC196A0A1B0GTZ2 297 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 BAG4O95429 457 aaKnown RBP19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 CCL5P13501 91 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 MAP2K5Q13163 448 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 RIOX2Q8IUF8 465 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 SHCBP1Q8NEM2 672 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 PRR12Q9ULL5 1215 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 ZDHHC9Q9Y397 364 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 ZNF536O15090 1300 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 TNKSO95271 1327 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 DNAH12Q6ZR08 3092 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 CCDC69A6NI79 296 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 SLC15A5A6NIM6 579 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 GOLGA8HP0CJ92 632 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 SNHG28P0DPA3 235 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 ADORA2AP29274 412 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 STAT2P52630 851 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 STK3Q13188 491 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 WTAPQ15007 396 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 PPP4R3BQ5MIZ7 849 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 FAM184AQ8NB25 1140 aa19.03■□□□□ 0.64
PDLIM1-201ENST00000329399 DCAF4Q8WV16 495 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms